Difference between revisions of "Guanine34-in-tRNAs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMACETOXID-RXN AMACETOXID-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.64-RXN 2.5.1.64-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-succinyl-5-enolpyru...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMACETOXID-RXN AMACETOXID-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.64-RXN 2.5.1.64-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate_synthase
 +
** protein_chloroplastic
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.4.3.21 EC-1.4.3.21]
+
** [http://enzyme.expasy.org/EC/2.2.1.9 EC-2.2.1.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[AMINO-ACETONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[METHYL-GLYOXAL]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[ISOCHORISMATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-9924]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 aminoacetone[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 methylglyoxal[c] '''+''' 1 hydrogen peroxide[c]
+
** 1 2-oxoglutarate[c] '''+''' 1 isochorismate[c] '''+''' 1 H+[c] '''=>''' 1 2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18325]]
+
* [[Tiso_gene_17551]]
−
** [[pantograph]]-[[creinhardtii]]
+
** IN-SILICO_ANNOTATION
−
* [[Tiso_gene_8756]]
+
***EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_1922]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[THRDLCTCAT-PWY]], L-threonine degradation III (to methylglyoxal): [http://metacyc.org/META/NEW-IMAGE?object=THRDLCTCAT-PWY THRDLCTCAT-PWY]
+
* [[PWY-5837]], 1,4-dihydroxy-2-naphthoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
* Category: [[annotation]]
−
*** [[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28186 28186]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25593 25593]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02529 R02529]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08165 R08165]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.4.3.21}}
+
{{#set: common name=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate_synthase}}
−
{{#set: gene associated=Tiso_gene_18325|Tiso_gene_8756}}
+
{{#set: common name=protein_chloroplastic}}
−
{{#set: in pathway=THRDLCTCAT-PWY}}
+
{{#set: ec number=EC-2.2.1.9}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_17551|Tiso_gene_1922}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY-5837}}
−
{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 01:17, 19 March 2018

Reaction 2.5.1.64-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate_synthase
    • protein_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5837, 1,4-dihydroxy-2-naphthoate biosynthesis: PWY-5837
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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