Difference between revisions of "CPD-12902"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMPSYN-RXN AMPSYN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.92-RXN 3.4.21.92-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ATP-dependent Clp p...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMPSYN-RXN AMPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.92-RXN 3.4.21.92-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** ATP-dependent Clp protease proteolytic subunit
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.3.2.2 EC-4.3.2.2]
+
** [http://enzyme.expasy.org/EC/3.4.21.92 EC-3.4.21.92]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ADENYLOSUCC]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[FUM]][c]
+
** 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 adenylo-succinate[c] '''<=>''' 1 AMP[c] '''+''' 1 fumarate[c]
+
** 1 a protein[c] '''+''' 1 H2O[c] '''=>''' 1 a peptide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_10324]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_11705]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_10005]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_999]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[primary_network]]
+
** Source: [[orthology-esiliculosus]]
−
* [[annotation]]:
+
*** Tool: [[pantograph]]
−
** [[pathwaytools]]:
+
* Category: [[annotation]]
−
*** [[experimental_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16853 16853]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01083 R01083]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21265 P21265]
+
** [http://www.uniprot.org/uniprot/P12208 P12208]
−
** [http://www.uniprot.org/uniprot/Q58339 Q58339]
+
** [http://www.uniprot.org/uniprot/Q9JU33 Q9JU33]
−
** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
+
** [http://www.uniprot.org/uniprot/Q9PE41 Q9PE41]
−
** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
+
** [http://www.uniprot.org/uniprot/P0A6G7 P0A6G7]
−
** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
+
** [http://www.uniprot.org/uniprot/P56156 P56156]
−
** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
+
** [http://www.uniprot.org/uniprot/P80244 P80244]
−
** [http://www.uniprot.org/uniprot/O65180 O65180]
+
** [http://www.uniprot.org/uniprot/O51556 O51556]
−
** [http://www.uniprot.org/uniprot/P12047 P12047]
+
** [http://www.uniprot.org/uniprot/O67357 O67357]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/O83520 O83520]
−
{{#set: ec number=EC-4.3.2.2}}
+
** [http://www.uniprot.org/uniprot/Q9HYR9 Q9HYR9]
−
{{#set: in pathway=PWY-7219}}
+
** [http://www.uniprot.org/uniprot/P63783 P63783]
−
{{#set: reconstruction category=manual}}
+
** [http://www.uniprot.org/uniprot/O84712 O84712]
−
{{#set: reconstruction source=primary_network}}
+
** [http://www.uniprot.org/uniprot/P43867 P43867]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/O51698 O51698]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P0A526 P0A526]
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
** [http://www.uniprot.org/uniprot/Q9PLM0 Q9PLM0]
 +
** [http://www.uniprot.org/uniprot/Q9K709 Q9K709]
 +
** [http://www.uniprot.org/uniprot/Q9WZF9 Q9WZF9]
 +
** [http://www.uniprot.org/uniprot/Q9RSZ7 Q9RSZ7]
 +
** [http://www.uniprot.org/uniprot/Q9I2U1 Q9I2U1]
 +
** [http://www.uniprot.org/uniprot/Q9K888 Q9K888]
 +
** [http://www.uniprot.org/uniprot/P38002 P38002]
 +
** [http://www.uniprot.org/uniprot/Q9Z759 Q9Z759]
 +
** [http://www.uniprot.org/uniprot/Q9Z832 Q9Z832]
 +
** [http://www.uniprot.org/uniprot/P54413 P54413]
 +
** [http://www.uniprot.org/uniprot/Q9KQS6 Q9KQS6]
 +
** [http://www.uniprot.org/uniprot/Q9ZD29 Q9ZD29]
 +
** [http://www.uniprot.org/uniprot/Q9ZL50 Q9ZL50]
 +
** [http://www.uniprot.org/uniprot/P12209 P12209]
 +
** [http://www.uniprot.org/uniprot/Q7M2F6 Q7M2F6]
 +
** [http://www.uniprot.org/uniprot/P24064 P24064]
 +
** [http://www.uniprot.org/uniprot/P36387 P36387]
 +
** [http://www.uniprot.org/uniprot/P26567 P26567]
 +
** [http://www.uniprot.org/uniprot/P48883 P48883]
 +
** [http://www.uniprot.org/uniprot/Q16740 Q16740]
 +
** [http://www.uniprot.org/uniprot/P54416 P54416]
 +
** [http://www.uniprot.org/uniprot/Q59993 Q59993]
 +
** [http://www.uniprot.org/uniprot/P74467 P74467]
 +
** [http://www.uniprot.org/uniprot/P30063 P30063]
 +
** [http://www.uniprot.org/uniprot/Q36863 Q36863]
 +
** [http://www.uniprot.org/uniprot/Q42886 Q42886]
 +
** [http://www.uniprot.org/uniprot/P56317 P56317]
 +
** [http://www.uniprot.org/uniprot/P41609 P41609]
 +
** [http://www.uniprot.org/uniprot/Q9X7R9 Q9X7R9]
 +
** [http://www.uniprot.org/uniprot/O48931 O48931]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ATP-dependent Clp protease proteolytic subunit}}
 +
{{#set: ec number=EC-3.4.21.92}}
 +
{{#set: gene associated=Tiso_gene_10324|Tiso_gene_11705|Tiso_gene_10005|Tiso_gene_999}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 01:17, 19 March 2018

Reaction 3.4.21.92-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ATP-dependent Clp protease proteolytic subunit
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-12902&oldid=29602"