Difference between revisions of "MRNA-Fragments"

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(Created page with "Category:Gene == Gene Tiso_gene_18689 == * Synonym(s): == Reactions associated == * 1.14.11.2-RXN ** pantograph-esiliculosus * RXN490-3641 ** pantograph...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** s-adenosylmethionin...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_18689 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** s-adenosylmethionine_decarboxylase_proenzyme
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.50 EC-4.1.1.50]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.14.11.2-RXN]]
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* With identifiers:
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** [[pantograph]]-[[esiliculosus]]
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** 1 [[PROTON]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[RXN490-3641]]
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* With common name(s):
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** 1 H+[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11030]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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* [[Tiso_gene_4269]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[ARGSPECAT-PWY]], spermine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ARGSPECAT-PWY ARGSPECAT-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6834]], spermidine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: reaction associated=1.14.11.2-RXN|RXN490-3641}}
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15981 15981]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00178 R00178]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P82184 P82184]
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** [http://www.uniprot.org/uniprot/P21182 P21182]
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** [http://www.uniprot.org/uniprot/P0A7F6 P0A7F6]
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** [http://www.uniprot.org/uniprot/P17707 P17707]
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** [http://www.uniprot.org/uniprot/P28918 P28918]
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** [http://www.uniprot.org/uniprot/P17708 P17708]
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** [http://www.uniprot.org/uniprot/P50243 P50243]
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** [http://www.uniprot.org/uniprot/P46255 P46255]
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** [http://www.uniprot.org/uniprot/Q04694 Q04694]
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** [http://www.uniprot.org/uniprot/Q42679 Q42679]
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** [http://www.uniprot.org/uniprot/Q42829 Q42829]
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** [http://www.uniprot.org/uniprot/P79888 P79888]
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** [http://www.uniprot.org/uniprot/O04009 O04009]
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** [http://www.uniprot.org/uniprot/O24575 O24575]
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** [http://www.uniprot.org/uniprot/Q43820 Q43820]
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** [http://www.uniprot.org/uniprot/Q39676 Q39676]
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** [http://www.uniprot.org/uniprot/Q39677 Q39677]
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** [http://www.uniprot.org/uniprot/O49972 O49972]
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** [http://www.uniprot.org/uniprot/O65354 O65354]
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** [http://www.uniprot.org/uniprot/O02655 O02655]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=s-adenosylmethionine_decarboxylase_proenzyme}}
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{{#set: ec number=EC-4.1.1.50}}
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{{#set: gene associated=Tiso_gene_11030|Tiso_gene_4269}}
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{{#set: in pathway=BSUBPOLYAMSYN-PWY|ARGSPECAT-PWY|PWY-6834}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 01:17, 19 March 2018

Reaction SAMDECARB-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • s-adenosylmethionine_decarboxylase_proenzyme
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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