Difference between revisions of "Main Page"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONDEHYDROG-RXN 6PGLUCONDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosp...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARSYN-RXN AICARSYN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONDEHYDROG-RXN 6PGLUCONDEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARSYN-RXN AICARSYN-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.351 EC-1.1.1.351]
+
** [http://enzyme.expasy.org/EC/4.3.2.2 EC-4.3.2.2]
 
* Synonym(s):
 
* Synonym(s):
−
** 6PGD
 
−
** 6-phosphogluconic carboxylase
 
−
** 6-phosphogluconic dehydrogenase
 
−
** Phosphogluconic acid dehydrogenase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-2961]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[RIBULOSE-5P]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
+
** 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''<=>''' 1 [[FUM]][c] '''+''' 1 [[AICAR]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-gluconate 6-phosphate[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 CO2[c] '''+''' 1 D-ribulose 5-phosphate[c] '''+''' 1 NAD(P)H[c]
+
** 1 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole[c] '''<=>''' 1 fumarate[c] '''+''' 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_20238]]
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[synechocystis]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
−
* [[Tiso_gene_7157]]
 
−
** [[pantograph]]-[[synechocystis]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
−
* [[Tiso_gene_91]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
+
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
−
** '''14''' reactions found over '''18''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-primary_network]]
−
*** [[creinhardtii]]
+
* Category: [[annotation]]
−
*** [[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10116 10116]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23920 23920]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04559 R04559]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P14332 P14332]
+
** [http://www.uniprot.org/uniprot/P21265 P21265]
−
** [http://www.uniprot.org/uniprot/P31072 P31072]
+
** [http://www.uniprot.org/uniprot/Q58339 Q58339]
−
** [http://www.uniprot.org/uniprot/Q9CDN4 Q9CDN4]
+
** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
−
** [http://www.uniprot.org/uniprot/P47506 P47506]
+
** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
−
** [http://www.uniprot.org/uniprot/Q9JWS3 Q9JWS3]
+
** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
−
** [http://www.uniprot.org/uniprot/P43774 P43774]
+
** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
−
** [http://www.uniprot.org/uniprot/P12013 P12013]
+
** [http://www.uniprot.org/uniprot/O65180 O65180]
−
** [http://www.uniprot.org/uniprot/P41576 P41576]
+
** [http://www.uniprot.org/uniprot/P12047 P12047]
−
** [http://www.uniprot.org/uniprot/P00350 P00350]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P00349 P00349]
+
{{#set: ec number=EC-4.3.2.2}}
−
** [http://www.uniprot.org/uniprot/P52209 P52209]
+
{{#set: in pathway=PWY-6123|PWY-6124|PWY-7234}}
−
** [http://www.uniprot.org/uniprot/P41581 P41581]
+
{{#set: reconstruction category=manual|annotation}}
−
** [http://www.uniprot.org/uniprot/P41582 P41582]
+
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation}}
−
** [http://www.uniprot.org/uniprot/Q59275 Q59275]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P41583 P41583]
+
−
** [http://www.uniprot.org/uniprot/Q60254 Q60254]
+
−
** [http://www.uniprot.org/uniprot/P37754 P37754]
+
−
** [http://www.uniprot.org/uniprot/Q59410 Q59410]
+
−
** [http://www.uniprot.org/uniprot/P52207 P52207]
+
−
** [http://www.uniprot.org/uniprot/P70718 P70718]
+
−
** [http://www.uniprot.org/uniprot/Q7M451 Q7M451]
+
−
** [http://www.uniprot.org/uniprot/P41572 P41572]
+
−
** [http://www.uniprot.org/uniprot/P14062 P14062]
+
−
** [http://www.uniprot.org/uniprot/P21577 P21577]
+
−
** [http://www.uniprot.org/uniprot/P38720 P38720]
+
−
** [http://www.uniprot.org/uniprot/Q40311 Q40311]
+
−
** [http://www.uniprot.org/uniprot/P53319 P53319]
+
−
** [http://www.uniprot.org/uniprot/O81237 O81237]
+
−
** [http://www.uniprot.org/uniprot/O81238 O81238]
+
−
** [http://www.uniprot.org/uniprot/O81239 O81239]
+
−
** [http://www.uniprot.org/uniprot/O22111 O22111]
+
−
** [http://www.uniprot.org/uniprot/Q17761 Q17761]
+
−
** [http://www.uniprot.org/uniprot/O32911 O32911]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]}}
+
−
{{#set: ec number=EC-1.1.1.351}}
+
−
{{#set: common name=6PGD|6-phosphogluconic carboxylase|6-phosphogluconic dehydrogenase|Phosphogluconic acid dehydrogenase}}
+
−
{{#set: gene associated=Tiso_gene_20238|Tiso_gene_7157|Tiso_gene_91}}
+
−
{{#set: in pathway=P122-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
+

Revision as of 00:18, 19 March 2018

Reaction AICARSYN-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole[c] <=> 1 fumarate[c] + 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c]

Genes associated with this reaction

Pathways

  • PWY-6123, inosine-5'-phosphate biosynthesis I: PWY-6123
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6124, inosine-5'-phosphate biosynthesis II: PWY-6124
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III: PWY-7234
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




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