Difference between revisions of "Tiso gene 12097"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14131 RXN-14131] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase **...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-723 CPD-723] == * smiles: ** CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC[CH]1(CC(O)C(O)CC(C...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14131 RXN-14131] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-723 CPD-723] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC[CH]1(CC(O)C(O)CC(C)1[CH]2CCC(C)34))))
 
* common name:
 
* common name:
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** acyl-coenzyme_a_oxidase
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** 6-deoxocastasterone
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** acyl-_dehydrogenase
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* inchi key:
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** ORF
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** InChIKey=VXBLCLVRWCLEOX-BFYSZXNBSA-N
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** acyl-CoA_dehydrogenase
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* molecular weight:
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* ec number:
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** 450.701   
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** [http://enzyme.expasy.org/EC/1.3.8.8 EC-1.3.8.8]
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* Synonym(s):
 
* Synonym(s):
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** deoxocastasterone
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-778]]
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** 1 [[ETF-Oxidized]][c] '''+''' 1 [[TETRADECANOYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD-15568]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 myristoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 2-trans-tetradecenoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_883]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18566]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5991]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17967]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6475]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16631]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
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** '''6''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* LIPID_MAPS : LMST01030127
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28359 28359]
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=13870433 13870433]
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{{#set: common name=acyl-coenzyme_a_oxidase}}
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* HMDB : HMDB33984
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{{#set: common name=acyl-_dehydrogenase}}
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* CHEBI:
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{{#set: common name=ORF}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=20712 20712]
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{{#set: common name=acyl-CoA_dehydrogenase}}
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* LIGAND-CPD:
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{{#set: ec number=EC-1.3.8.8}}
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** [http://www.genome.jp/dbget-bin/www_bget?C15802 C15802]
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{{#set: gene associated=Tiso_gene_883|Tiso_gene_18566|Tiso_gene_5991|Tiso_gene_17967|Tiso_gene_6475|Tiso_gene_16631}}
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{{#set: smiles=CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC[CH]1(CC(O)C(O)CC(C)1[CH]2CCC(C)34))))}}
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{{#set: in pathway=PWY-7654}}
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{{#set: common name=6-deoxocastasterone}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=VXBLCLVRWCLEOX-BFYSZXNBSA-N}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: molecular weight=450.701    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=deoxocastasterone}}
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{{#set: consumed by=RXN-778}}

Revision as of 15:44, 21 March 2018

Metabolite CPD-723

  • smiles:
    • CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC[CH]1(CC(O)C(O)CC(C)1[CH]2CCC(C)34))))
  • common name:
    • 6-deoxocastasterone
  • inchi key:
    • InChIKey=VXBLCLVRWCLEOX-BFYSZXNBSA-N
  • molecular weight:
    • 450.701
  • Synonym(s):
    • deoxocastasterone

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • LIPID_MAPS : LMST01030127
  • PUBCHEM:
  • HMDB : HMDB33984
  • CHEBI:
  • LIGAND-CPD:
"CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC[CH]1(CC(O)C(O)CC(C)1[CH]2CCC(C)34))))" cannot be used as a page name in this wiki.



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