Difference between revisions of "NICOTINATE NUCLEOTIDE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12575 RXN-12575] == * direction: ** LEFT-TO-RIGHT * common name: ** all-trans retinyl-ester hyd...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-373 PWY66-373] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12575 RXN-12575] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-373 PWY66-373] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
 
* common name:
 
* common name:
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** all-trans retinyl-ester hydrolase
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** sucrose degradation V (sucrose α-glucosidase)
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** ORF
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** serine_esterase
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** alpha_beta_hydrolase
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** sialate_o-acetylesterase-like_protein
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** lysophospholipase
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** protein_chloroplastic
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** alpha_beta_hydrolase_fold_protein
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** para-nitrobenzyl_esterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''5''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[All-trans-Retinyl-Esters]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Long-Chain-Fatty-Acids]][c] '''+''' 1 [[CPD-13524]][c]
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* [[3.2.1.48-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 H2O[c] '''+''' 1 an all-trans-retinyl ester[c] '''=>''' 1 H+[c] '''+''' 1 a long-chain fatty acid[c] '''+''' 1 all-trans-retinol[c]
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*** [[Tiso_gene_12644]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[KETOHEXOKINASE-RXN]]
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* [[Tiso_gene_16518]]
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** 1 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_849]]
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* [[Tiso_gene_11351]]
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** 1 reconstruction source(s) associated:
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** EXPERIMENTAL_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***AUTOMATED-NAME-MATCH
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* [[RXN-8631]]
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* [[Tiso_gene_1537]]
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** 6 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_9179]]
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_65]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_12272]]
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* [[Tiso_gene_1922]]
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*** [[Tiso_gene_14568]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_9119]]
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***EC-NUMBER
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*** [[Tiso_gene_9118]]
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* [[Tiso_gene_4606]]
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** 3 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_17029]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[TRIOSEPISOMERIZATION-RXN]]
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***EC-NUMBER
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** 4 associated gene(s):
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* [[Tiso_gene_1538]]
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*** [[Tiso_gene_19961]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_20000]]
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* [[Tiso_gene_9429]]
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*** [[Tiso_gene_19962]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_10646]]
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***EC-NUMBER
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** 7 reconstruction source(s) associated:
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* [[Tiso_gene_19778]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_4650]]
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*** [[orthology-athaliana]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-synechocystis]]
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***EC-NUMBER
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*** [[manual-primary_network]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-creinhardtii]]
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* [[Tiso_gene_12686]]
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== Reaction(s) not found ==
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=TRIOKINASE-RXN TRIOKINASE-RXN]
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***EC-NUMBER
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* [[Tiso_gene_2556]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10066]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6857]], retinol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6857 PWY-6857]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-40674}}
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{{#set: common name=all-trans retinyl-ester hydrolase}}
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{{#set: common name=sucrose degradation V (sucrose α-glucosidase)}}
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{{#set: common name=ORF}}
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{{#set: reaction found=4}}
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{{#set: common name=serine_esterase}}
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{{#set: total reaction=5}}
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{{#set: common name=alpha_beta_hydrolase}}
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{{#set: completion rate=80.0}}
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: common name=lysophospholipase}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: common name=para-nitrobenzyl_esterase}}
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{{#set: ec number=EC-3.1.1.1}}
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{{#set: gene associated=Tiso_gene_16518|Tiso_gene_11351|Tiso_gene_1537|Tiso_gene_1922|Tiso_gene_4606|Tiso_gene_17029|Tiso_gene_1538|Tiso_gene_9429|Tiso_gene_19778|Tiso_gene_4650|Tiso_gene_12686|Tiso_gene_2556|Tiso_gene_10066}}
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{{#set: in pathway=PWY-6857}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:44, 21 March 2018

Pathway PWY66-373

  • taxonomic range:
  • common name:
    • sucrose degradation V (sucrose α-glucosidase)
  • Synonym(s):

Reaction(s) found

4 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NICOTINATE_NUCLEOTIDE&oldid=29865"