Difference between revisions of "R-3-hydroxypetroselinoyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Gene == Gene Tiso_gene_10752 == * right end position: ** 4361 * transcription direction: ** NEGATIVE * left end position: ** 45 * centisome position: ** 0.5406704...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] ==
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== Gene Tiso_gene_10752 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4361
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* common name:
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* transcription direction:
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** pyrroline-5-carboxylate_reductase
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** NEGATIVE
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** ORF
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* left end position:
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** ankyrin_repeat-containing_protein
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** 45
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
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** 0.54067045   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.26.3-RXN]]
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** 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
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* With common name(s):
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** 1 NAD(P)H[c] '''+''' 2 H+[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''=>''' 1 L-proline[c] '''+''' 1 NAD(P)+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_8625]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19254]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17059]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20218]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=4361}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
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{{#set: left end position=45}}
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* UNIPROT:
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{{#set: centisome position=0.54067045    }}
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** [http://www.uniprot.org/uniprot/P32322 P32322]
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{{#set: reaction associated=3.1.26.3-RXN}}
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** [http://www.uniprot.org/uniprot/P27771 P27771]
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** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
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** [http://www.uniprot.org/uniprot/P14383 P14383]
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** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
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** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
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** [http://www.uniprot.org/uniprot/Q12740 Q12740]
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** [http://www.uniprot.org/uniprot/P22008 P22008]
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** [http://www.uniprot.org/uniprot/P54904 P54904]
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** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
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** [http://www.uniprot.org/uniprot/P17817 P17817]
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** [http://www.uniprot.org/uniprot/P32263 P32263]
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** [http://www.uniprot.org/uniprot/Q12641 Q12641]
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** [http://www.uniprot.org/uniprot/P46725 P46725]
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** [http://www.uniprot.org/uniprot/P74572 P74572]
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** [http://www.uniprot.org/uniprot/Q04708 Q04708]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyrroline-5-carboxylate_reductase}}
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{{#set: common name=ORF}}
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{{#set: common name=ankyrin_repeat-containing_protein}}
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{{#set: ec number=EC-1.5.1.2}}
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{{#set: gene associated=Tiso_gene_8625|Tiso_gene_19254|Tiso_gene_17059|Tiso_gene_20218}}
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{{#set: in pathway=PWY-6344|ARG-PRO-PWY|PROSYN-PWY|PWY-4981|PWY-3341}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:45, 21 March 2018

Gene Tiso_gene_10752

  • right end position:
    • 4361
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 45
  • centisome position:
    • 0.54067045
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=R-3-hydroxypetroselinoyl-ACPs&oldid=29985"