Difference between revisions of "Tiso gene 9683"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase **...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRPCAT-PWY TRPCAT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRPCAT-PWY TRPCAT-PWY] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** acyl-coenzyme_a_oxidase
+
** L-tryptophan degradation I (via anthranilate)
** ORF
+
** acyl-_dehydrogenase
+
** acyl-CoA_dehydrogenase
+
* ec number:
+
** [http://enzyme.expasy.org/EC/1.3.8.9 EC-1.3.8.9]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** anthranilate pathway
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''2''' reactions found over '''3''' reactions in the full pathway
** 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PALMITYL-COA]][c] '''=>''' 1 [[CPD0-2117]][c] '''+''' 1 [[ETF-Reduced]][c]
+
* [[ARYLFORMAMIDASE-RXN]]
* With common name(s):
+
** 1 associated gene(s):
** 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 palmitoyl-CoA[c] '''=>''' 1 trans-hexadec-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
+
*** [[Tiso_gene_16921]]
 
+
** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
+
*** [[orthology-creinhardtii]]
Genes have been associated with this reaction based on different elements listed below.
+
* [[KYNURENINASE-RXN]]
* [[Tiso_gene_6475]]
+
** 2 associated gene(s):
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_10685]]
***EC-NUMBER
+
*** [[Tiso_gene_10684]]
* [[Tiso_gene_5991]]
+
** 1 reconstruction source(s) associated:
** IN-SILICO_ANNOTATION
+
*** [[annotation-in-silico_annotation]]
***EC-NUMBER
+
== Reaction(s) not found ==
* [[Tiso_gene_16631]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665]
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_18566]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_883]]
+
** EXPERIMENTAL_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_17967]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
== Pathways  ==
+
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
+
** '''6''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
+
** '''6''' reactions found over '''22''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[annotation]]
+
** Source: [[annotation-experimental_annotation]]
+
*** Tool: [[pathwaytools]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2}}
{{#set: common name=acyl-coenzyme_a_oxidase}}
+
{{#set: common name=L-tryptophan degradation I (via anthranilate)}}
{{#set: common name=ORF}}
+
{{#set: common name=anthranilate pathway}}
{{#set: common name=acyl-_dehydrogenase}}
+
{{#set: reaction found=2}}
{{#set: common name=acyl-CoA_dehydrogenase}}
+
{{#set: total reaction=3}}
{{#set: ec number=EC-1.3.8.9}}
+
{{#set: completion rate=67.0}}
{{#set: gene associated=Tiso_gene_6475|Tiso_gene_5991|Tiso_gene_16631|Tiso_gene_18566|Tiso_gene_883|Tiso_gene_17967}}
+
{{#set: in pathway=PWY-7654|PWY-7656}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 15:46, 21 March 2018

Pathway TRPCAT-PWY

  • taxonomic range:
  • common name:
    • L-tryptophan degradation I (via anthranilate)
  • Synonym(s):
    • anthranilate pathway

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links