Difference between revisions of "ALPHA-RIBAZOLE-5-P"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLHOMOSER-CYS-RXN ACETYLHOMOSER-CYS-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLHOMOSER-CYS-RXN ACETYLHOMOSER-CYS-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** lysine--trna_ligase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.6 EC-6.1.1.6]
+
** [http://enzyme.expasy.org/EC/2.5.1.49 EC-2.5.1.49]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[LYS-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LYS]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-LYS-tRNAs]][c]
+
** 1 [[CPD-667]][c] '''+''' 1 [[HS]][c] '''<=>''' 1 [[ACET]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[HOMO-CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a tRNAlys[c] '''+''' 1 ATP[c] '''+''' 1 L-lysine[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-lysyl-[tRNAlys][c]
+
** 1 O-acetyl-L-homoserine[c] '''+''' 1 hydrogen sulfide[c] '''<=>''' 1 acetate[c] '''+''' 1 H+[c] '''+''' 1 L-homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6705]]
+
* Gene: [[Tiso_gene_3732]]
−
** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
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−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_16635]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWY-5344]], L-homocysteine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5344 PWY-5344]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27822 27822]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03658 R03658]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01287 R01287]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
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** [http://www.uniprot.org/uniprot/P41258 P41258]
+
{{#set: ec number=EC-2.5.1.49}}
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** [http://www.uniprot.org/uniprot/P46861 P46861]
+
{{#set: gene associated=Tiso_gene_3732}}
−
** [http://www.uniprot.org/uniprot/P47382 P47382]
+
{{#set: in pathway=PWY-5344}}
−
** [http://www.uniprot.org/uniprot/O57963 O57963]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/O51603 O51603]
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
** [http://www.uniprot.org/uniprot/Q9JTT7 Q9JTT7]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/O83650 O83650]
+
−
** [http://www.uniprot.org/uniprot/Q9X231 Q9X231]
+
−
** [http://www.uniprot.org/uniprot/P43825 P43825]
+
−
** [http://www.uniprot.org/uniprot/Q9ZDF8 Q9ZDF8]
+
−
** [http://www.uniprot.org/uniprot/O84786 O84786]
+
−
** [http://www.uniprot.org/uniprot/Q9Z6X5 Q9Z6X5]
+
−
** [http://www.uniprot.org/uniprot/Q9CII7 Q9CII7]
+
−
** [http://www.uniprot.org/uniprot/P56126 P56126]
+
−
** [http://www.uniprot.org/uniprot/Q9ZMP8 Q9ZMP8]
+
−
** [http://www.uniprot.org/uniprot/O67258 O67258]
+
−
** [http://www.uniprot.org/uniprot/O84002 O84002]
+
−
** [http://www.uniprot.org/uniprot/Q9RHV9 Q9RHV9]
+
−
** [http://www.uniprot.org/uniprot/P32048 P32048]
+
−
** [http://www.uniprot.org/uniprot/P37879 P37879]
+
−
** [http://www.uniprot.org/uniprot/Q48986 Q48986]
+
−
** [http://www.uniprot.org/uniprot/P0A8N7 P0A8N7]
+
−
** [http://www.uniprot.org/uniprot/P37477 P37477]
+
−
** [http://www.uniprot.org/uniprot/P75500 P75500]
+
−
** [http://www.uniprot.org/uniprot/P95970 P95970]
+
−
** [http://www.uniprot.org/uniprot/P73443 P73443]
+
−
** [http://www.uniprot.org/uniprot/P15180 P15180]
+
−
** [http://www.uniprot.org/uniprot/P0A8N3 P0A8N3]
+
−
** [http://www.uniprot.org/uniprot/P0A8N5 P0A8N5]
+
−
** [http://www.uniprot.org/uniprot/Q43776 Q43776]
+
−
** [http://www.uniprot.org/uniprot/O74059 O74059]
+
−
** [http://www.uniprot.org/uniprot/O30522 O30522]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=lysine--trna_ligase}}
+
−
{{#set: ec number=EC-6.1.1.6}}
+
−
{{#set: gene associated=Tiso_gene_6705|Tiso_gene_16635}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 15:48, 21 March 2018

Reaction ACETYLHOMOSER-CYS-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 O-acetyl-L-homoserine[c] + 1 hydrogen sulfide[c] <=> 1 acetate[c] + 1 H+[c] + 1 L-homocysteine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5344, L-homocysteine biosynthesis: PWY-5344
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




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