Difference between revisions of "DNA-Combined-With-Exogenous-DNA"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=P-COUMAROYL-COA P-COUMAROYL-COA] == * smiles: ** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=CC(O)=...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8631 RXN-8631] == * direction: ** LEFT-TO-RIGHT * common name: ** fructose-bisphosphate_aldolas...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=P-COUMAROYL-COA P-COUMAROYL-COA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8631 RXN-8631] ==
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* smiles:
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* direction:
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** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=CC(O)=CC=1))COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=DMZOKBALNZWDKI-MATMFAIHSA-J
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* common name:
 
* common name:
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** 4-coumaroyl-CoA
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** fructose-bisphosphate_aldolase
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* molecular weight:
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* ec number:
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** 909.648   
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** [http://enzyme.expasy.org/EC/4.1.2.13 EC-4.1.2.13]
 
* Synonym(s):
 
* Synonym(s):
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** p-coumaroyl-CoA
 
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** 4-hydroxycinnamoyl-CoA
 
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** 4-coumaryl-CoA
 
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** p-coumaryl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-11244]]
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* With identifiers:
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* [[RXN-1101]]
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** 1 [[FRU1P]][c] '''=>''' 1 [[GLYCERALD]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c]
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* [[RXN-3142]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 β-D-fructofuranose 1-phosphate[c] '''=>''' 1 D-glyceraldehyde[c] '''+''' 1 glycerone phosphate[c]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9179]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_65]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_12272]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14568]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_9119]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_9118]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY66-373]], sucrose degradation V (sucrose α-glucosidase): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-373 PWY66-373]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266584 45266584]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30851 30851]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15499 15499]
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** [http://www.genome.jp/dbget-bin/www_bget?R02568 R02568]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00223 C00223]
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{{#set: common name=fructose-bisphosphate_aldolase}}
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* HMDB : HMDB60153
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{{#set: ec number=EC-4.1.2.13}}
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{{#set: smiles=CC(C)(C(O)C(=O)NCCC(=O)NCCSC(=O)C=CC1(C=CC(O)=CC=1))COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]}}
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{{#set: gene associated=Tiso_gene_9179|Tiso_gene_65|Tiso_gene_12272|Tiso_gene_14568|Tiso_gene_9119|Tiso_gene_9118}}
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{{#set: inchi key=InChIKey=DMZOKBALNZWDKI-MATMFAIHSA-J}}
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{{#set: in pathway=PWY66-373}}
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{{#set: common name=4-coumaroyl-CoA}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: molecular weight=909.648    }}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: common name=p-coumaroyl-CoA|4-hydroxycinnamoyl-CoA|4-coumaryl-CoA|p-coumaryl-CoA}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: consumed by=RXN-11244|RXN-1101|RXN-3142}}
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{{#set: produced by=4-COUMARATE--COA-LIGASE-RXN}}
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Revision as of 15:48, 21 March 2018

Reaction RXN-8631

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • fructose-bisphosphate_aldolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-373, sucrose degradation V (sucrose α-glucosidase): PWY66-373
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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