Difference between revisions of "Tiso gene 3522"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ALPHA-AMINO-EPSILON-KETO-PIMELATE L-ALPHA-AMINO-EPSILON-KETO-PIMELATE] == * smiles: ** C([O-]...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD+-ADP-RIBOSYLTRANSFERASE-RXN NAD+-ADP-RIBOSYLTRANSFERASE-RXN] == * direction: ** REVERSIBLE * co...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ALPHA-AMINO-EPSILON-KETO-PIMELATE L-ALPHA-AMINO-EPSILON-KETO-PIMELATE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD+-ADP-RIBOSYLTRANSFERASE-RXN NAD+-ADP-RIBOSYLTRANSFERASE-RXN] ==
−
* smiles:
+
* direction:
−
** C([O-])(=O)C(CCCC(C([O-])=O)=O)[N+]
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** REVERSIBLE
−
* inchi key:
+
−
** InChIKey=UKCSFKLWNHUBDY-BYPYZUCNSA-M
+
 
* common name:
 
* common name:
−
** L-α-amino-ε-keto-pimelate
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** formin-d-like
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* molecular weight:
+
** ORF
−
** 188.16   
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** nod3_protein
 +
** tccd-inducible-parp-like_domain-containing_protein
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.4.2.30 EC-2.4.2.30]
 
* Synonym(s):
 
* Synonym(s):
−
** L-2-Amino-6-oxopimelate
 
−
** L-2-Amino-6-oxoheptanedioate
 
  
−
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[NAD]][c] '''+''' 1 [[ADP-D-Ribosyl-Acceptors]][c] '''<=>''' 1 [[ADP-D-Ribosyl-Acceptors]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NIACINAMIDE]][c]
−
* [[RXN-4821]]
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* With common name(s):
 +
** 1 NAD+[c] '''+''' 1 an ADP-D-ribosyl acceptor[c] '''<=>''' 1 an ADP-D-ribosyl acceptor[c] '''+''' 1 H+[c] '''+''' 1 nicotinamide[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_10080]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_342]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_11399]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3487]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_451]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9412]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16863]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10079]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9411]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_848]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_450]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5199]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_12360]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14353]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10122]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_671]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_2309]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_4453]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_12351]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17992]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3971]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_4831]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_12350]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9065]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18366]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16302]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13134]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_4452]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25202391 25202391]
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** [http://www.genome.jp/dbget-bin/www_bget?R04176 R04176]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58556 58556]
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** [http://www.uniprot.org/uniprot/P09874 P09874]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P35875 P35875]
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** [http://www.genome.jp/dbget-bin/www_bget?C03871 C03871]
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** [http://www.uniprot.org/uniprot/P26446 P26446]
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{{#set: smiles=C([O-])(=O)C(CCCC(C([O-])=O)=O)[N+]}}
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** [http://www.uniprot.org/uniprot/P18493 P18493]
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{{#set: inchi key=InChIKey=UKCSFKLWNHUBDY-BYPYZUCNSA-M}}
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** [http://www.uniprot.org/uniprot/Q08824 Q08824]
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{{#set: common name=L-&alpha;-amino-&epsilon;-keto-pimelate}}
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** [http://www.uniprot.org/uniprot/P11103 P11103]
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{{#set: molecular weight=188.16    }}
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** [http://www.uniprot.org/uniprot/P14299 P14299]
−
{{#set: common name=L-2-Amino-6-oxopimelate|L-2-Amino-6-oxoheptanedioate}}
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** [http://www.uniprot.org/uniprot/P27008 P27008]
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{{#set: reversible reaction associated=RXN-4821}}
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** [http://www.uniprot.org/uniprot/P31669 P31669]
 +
** [http://www.uniprot.org/uniprot/Q11208 Q11208]
 +
** [http://www.uniprot.org/uniprot/Q11207 Q11207]
 +
** [http://www.uniprot.org/uniprot/O50017 O50017]
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** [http://www.uniprot.org/uniprot/O24570 O24570]
 +
** [http://www.uniprot.org/uniprot/Q9ZP54 Q9ZP54]
 +
** [http://www.uniprot.org/uniprot/P04977 P04977]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=formin-d-like}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=nod3_protein}}
 +
{{#set: common name=tccd-inducible-parp-like_domain-containing_protein}}
 +
{{#set: ec number=EC-2.4.2.30}}
 +
{{#set: gene associated=Tiso_gene_10080|Tiso_gene_342|Tiso_gene_11399|Tiso_gene_3487|Tiso_gene_451|Tiso_gene_9412|Tiso_gene_16863|Tiso_gene_10079|Tiso_gene_9411|Tiso_gene_848|Tiso_gene_450|Tiso_gene_5199|Tiso_gene_12360|Tiso_gene_14353|Tiso_gene_10122|Tiso_gene_671|Tiso_gene_2309|Tiso_gene_4453|Tiso_gene_12351|Tiso_gene_17992|Tiso_gene_3971|Tiso_gene_4831|Tiso_gene_12350|Tiso_gene_9065|Tiso_gene_18366|Tiso_gene_16302|Tiso_gene_13134|Tiso_gene_4452}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:49, 21 March 2018

Reaction NAD+-ADP-RIBOSYLTRANSFERASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • formin-d-like
    • ORF
    • nod3_protein
    • tccd-inducible-parp-like_domain-containing_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3522&oldid=30448"