Difference between revisions of "Reduced-2Fe-2S-Ferredoxins"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7908 RXN-7908] == * direction: ** LEFT-TO-RIGHT * common name: ** transcriptional_coactivator_p...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7908 RXN-7908] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** serotonin degradation
+
** transcriptional_coactivator_pterin_dehydratase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.96 EC-4.2.1.96]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''6''' reactions found over '''7''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-10777]]
+
** 1 [[CPD-5881]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[BIOPTERIN]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_5505]]
+
** 1 4α-hydroxy-tetrahydrobiopterin[c] '''=>''' 1 H2O[c] '''+''' 1 7,8-dihydrobiopterin[c]
−
** 1 reconstruction source(s) associated:
+
 
−
*** [[orthology-esiliculosus]]
+
== Genes associated with this reaction  ==
−
* [[RXN-10779]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** 0 associated gene:
+
* Gene: [[Tiso_gene_14844]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
−
* [[RXN-10780]]
+
* Gene: [[Tiso_gene_14845]]
−
** 2 associated gene(s):
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_7322]]
+
*** Assignment: EC-NUMBER
−
*** [[Tiso_gene_3513]]
+
** Source: [[orthology-esiliculosus]]
−
** 2 reconstruction source(s) associated:
+
== Pathways  ==
−
*** [[orthology-athaliana]]
+
* [[PHENYLALANINE-DEG1-PWY]], L-phenylalanine degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-DEG1-PWY PHENYLALANINE-DEG1-PWY]
−
*** [[orthology-esiliculosus]]
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[RXN-10781]]
+
== Reconstruction information  ==
−
** 5 associated gene(s):
+
* Category: [[orthology]]
−
*** [[Tiso_gene_6562]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[Tiso_gene_7649]]
+
*** Tool: [[pantograph]]
−
*** [[Tiso_gene_5424]]
+
* Category: [[annotation]]
−
*** [[Tiso_gene_5425]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_6563]]
+
*** Tool: [[pathwaytools]]
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
* [[RXN-10782]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_5505]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-esiliculosus]]
+
−
* [[RXN-10784]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_14141]]
+
−
*** [[Tiso_gene_14140]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10778 RXN-10778]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33208}}
+
* RHEA:
−
{{#set: common name=serotonin degradation}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11920 11920]
−
{{#set: reaction found=6}}
+
* LIGAND-RXN:
−
{{#set: total reaction=7}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04734 R04734]
−
{{#set: completion rate=86.0}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=transcriptional_coactivator_pterin_dehydratase}}
 +
{{#set: ec number=EC-4.2.1.96}}
 +
{{#set: gene associated=Tiso_gene_14844|Tiso_gene_14845}}
 +
{{#set: in pathway=PHENYLALANINE-DEG1-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:49, 21 March 2018

Reaction RXN-7908

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • transcriptional_coactivator_pterin_dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4α-hydroxy-tetrahydrobiopterin[c] => 1 H2O[c] + 1 7,8-dihydrobiopterin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Reduced-2Fe-2S-Ferredoxins&oldid=30471"