Difference between revisions of "RXN-9464"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_8159 == * left end position: ** 3776 * transcription direction: ** NEGATIVE * right end position: ** 11781 * centisome position: ** 29.9896...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16625 RXN-16625] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16625 RXN-16625] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** 3-oxoacyl-synthase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | * | + | ** 1 [[PROTON]][c] '''+''' 1 [[7Z-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[9Z-3-oxo-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
| − | ** | + | * With common name(s): |
| − | * [[ | + | ** 1 H+[c] '''+''' 1 a (7Z)-hexadec-7-enoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a (9Z)-3-oxo-octadec-9-enoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] |
| − | ** in-silico_annotation | + | |
| − | *** | + | == Genes associated with this reaction == |
| − | == Pathways | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[PWY- | + | * Gene: [[Tiso_gene_5939]] |
| − | * [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | * [[ | + | ** Source: [[annotation-experimental_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664] | ||
| + | ** '''10''' reactions found over '''14''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=3-oxoacyl-synthase}} |
| − | {{#set: | + | {{#set: ec number=EC-2.3.1.41}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_5939}} |
| − | {{#set: | + | {{#set: in pathway=PWY-7664}} |
| − | {{#set: | + | {{#set: reconstruction category=annotation}} |
| + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Revision as of 15:49, 21 March 2018
Contents
Reaction RXN-16625
- direction:
- LEFT-TO-RIGHT
- common name:
- 3-oxoacyl-synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 7Z-hexadec-7-enoyl-ACPs[c] + 1 MALONYL-ACP[c] => 1 9Z-3-oxo-octadec-9-enoyl-ACPs[c] + 1 ACP[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 H+[c] + 1 a (7Z)-hexadec-7-enoyl-[acp][c] + 1 a malonyl-[acp][c] => 1 a (9Z)-3-oxo-octadec-9-enoyl-[acp][c] + 1 a holo-[acyl-carrier protein][c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_5939
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
- 10 reactions found over 14 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
