Difference between revisions of "PWY-6898"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5424 RXN-5424] == * direction: ** LEFT-TO-RIGHT * common name: ** indole-3-glycol dehydrogenase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17127 RXN-17127] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a **...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5424 RXN-5424] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17127 RXN-17127] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** indole-3-glycol dehydrogenase
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** lipoate-protein_ligase_a
** polyketide_synthase
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** lipoate-protein_ligase
** ORF
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* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
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** [http://enzyme.expasy.org/EC/6.3.1.20 EC-6.3.1.20]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[PROTON]][c] '''+''' 1 [[3-INDOLYLGLYCOLALDEHYDE]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[INDOLE-3-GLYCOL]][c]
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** 1 [[LIPOIC-ACID]][c] '''+''' 1 [[Lipoyl-Protein-L-Lysine]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c]
 
* With common name(s):
 
* With common name(s):
** 1 H+[c] '''+''' 1 indole-3-glycol aldehyde[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 indole-3-glycol[c]
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** 1 (R)-lipoate[c] '''+''' 1 a [lipoyl-carrier protein]-L-lysine[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_6563]]
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* Gene: [[Tiso_gene_17216]]
** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
***EC-NUMBER
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*** Assignment: AUTOMATED-NAME-MATCH
* [[Tiso_gene_7649]]
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* Gene: [[Tiso_gene_4493]]
** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
* [[Tiso_gene_5424]]
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* Gene: [[Tiso_gene_17215]]
** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
* [[Tiso_gene_6562]]
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* Gene: [[Tiso_gene_8713]]
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
* [[Tiso_gene_5425]]
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* Gene: [[Tiso_gene_4494]]
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-3162]], L-tryptophan degradation V (side chain pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3162 PWY-3162]
 
** '''2''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=indole-3-glycol dehydrogenase}}
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{{#set: common name=lipoate-protein_ligase_a}}
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=lipoate-protein_ligase}}
{{#set: common name=ORF}}
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{{#set: ec number=EC-6.3.1.20}}
{{#set: ec number=EC-1.1.1.1}}
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{{#set: gene associated=Tiso_gene_17216|Tiso_gene_4493|Tiso_gene_17215|Tiso_gene_8713|Tiso_gene_4494}}
{{#set: gene associated=Tiso_gene_6563|Tiso_gene_7649|Tiso_gene_5424|Tiso_gene_6562|Tiso_gene_5425}}
+
{{#set: in pathway=}}
{{#set: in pathway=PWY-3162}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:50, 21 March 2018

Reaction RXN-17127

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipoate-protein_ligase_a
    • lipoate-protein_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links