Difference between revisions of "Tiso gene 17497"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME255 RME255] == * direction: ** LEFT-TO-RIGHT * common name: ** RME255 * Synonym(s): == Reaction...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE--TRNA-LIGASE-RXN GLUTAMINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME255 RME255] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE--TRNA-LIGASE-RXN GLUTAMINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** RME255
+
** glutamyl_or_glutaminyl_trna_synthetase
 +
** glutamine--trna_ligase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.1.1.18 EC-6.1.1.18]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 0.32 [[DCTP]][c] '''+''' 1.372 [[ATP]][c] '''+''' 2.372 [[WATER]][c] '''+''' 0.18 [[TTP]][c] '''+''' 0.32 [[DGTP]][c] '''+''' 0.18 [[DATP]][c] '''=>''' 1.372 [[Pi]][c] '''+''' 1.372 [[ADP]][c] '''+''' 1.0 [[DNA-Holder]][c] '''+''' 1.0 [[PPI]][c] '''+''' 2.372 [[PROTON]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[GLN-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLN-tRNAs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 0.32 dCTP[c] '''+''' 1.372 ATP[c] '''+''' 2.372 H2O[c] '''+''' 0.18 dTTP[c] '''+''' 0.32 dGTP[c] '''+''' 0.18 dATP[c] '''=>''' 1.372 phosphate[c] '''+''' 1.372 ADP[c] '''+''' 1.0 DNA[c] '''+''' 1.0 diphosphate[c] '''+''' 2.372 H+[c]
+
** 1 ATP[c] '''+''' 1 L-glutamine[c] '''+''' 1 a tRNAgln[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-glutaminyl-[tRNAgln][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_5915]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_11124]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_7596]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[manual]]
+
* Category: [[orthology]]
−
** Source: [[manual-primary_network]]
+
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20121 20121]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03652 R03652]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O59314 O59314]
 +
** [http://www.uniprot.org/uniprot/P43831 P43831]
 +
** [http://www.uniprot.org/uniprot/P47897 P47897]
 +
** [http://www.uniprot.org/uniprot/P14325 P14325]
 +
** [http://www.uniprot.org/uniprot/P95968 P95968]
 +
** [http://www.uniprot.org/uniprot/P13188 P13188]
 +
** [http://www.uniprot.org/uniprot/P00962 P00962]
 +
** [http://www.uniprot.org/uniprot/P52780 P52780]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=RME255}}
+
{{#set: common name=glutamyl_or_glutaminyl_trna_synthetase}}
−
{{#set: in pathway=}}
+
{{#set: common name=glutamine--trna_ligase}}
−
{{#set: reconstruction category=manual}}
+
{{#set: ec number=EC-6.1.1.18}}
−
{{#set: reconstruction source=manual-primary_network}}
+
{{#set: gene associated=Tiso_gene_5915|Tiso_gene_11124|Tiso_gene_7596}}
 +
{{#set: in pathway=TRNA-CHARGING-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:50, 21 March 2018

Reaction GLUTAMINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamyl_or_glutaminyl_trna_synthetase
    • glutamine--trna_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 L-glutamine[c] + 1 a tRNAgln[c] => 1 diphosphate[c] + 1 AMP[c] + 1 an L-glutaminyl-[tRNAgln][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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