Difference between revisions of "SUCCSEMIALDDEHYDROG-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_18813 == * left end position: ** 709 * transcription direction: ** NEGATIVE * right end position: ** 2708 * centisome position: ** 25.51277...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14025 RXN-14025] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_deoxy_cytosolic_type_c_pr...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_18813 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14025 RXN-14025] ==
−
* left end position:
+
* direction:
−
** 709
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** 5_deoxy_cytosolic_type_c_protein
−
* right end position:
+
** 5_-nucleotidase
−
** 2708
+
** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
−
* centisome position:
+
** ORF
−
** 25.512775   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[WATER]][c] '''+''' 1 [[UMP]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c]
−
***ec-number
+
* With common name(s):
−
== Pathways associated ==
+
** 1 H2O[c] '''+''' 1 UMP[c] '''=>''' 1 phosphate[c] '''+''' 1 uridine[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_14434]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6640]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_13929]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6988]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14246]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5911]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_14435]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7821]], tunicamycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7821 PWY-7821]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=709}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29360 29360]
−
{{#set: right end position=2708}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: centisome position=25.512775    }}
+
{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
−
{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
+
{{#set: common name=5_-nucleotidase}}
 +
{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-3.1.3.5}}
 +
{{#set: gene associated=Tiso_gene_14434|Tiso_gene_6640|Tiso_gene_13929|Tiso_gene_6988|Tiso_gene_14246|Tiso_gene_5911|Tiso_gene_14435}}
 +
{{#set: in pathway=PWY-7185|PWY-7821}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:50, 21 March 2018

Reaction RXN-14025

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5_deoxy_cytosolic_type_c_protein
    • 5_-nucleotidase
    • probable_cytosolic_imp-gmp_specific_5_-nucleotidase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 UMP[c] => 1 phosphate[c] + 1 uridine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7185, UTP and CTP dephosphorylation I: PWY-7185
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7821, tunicamycin biosynthesis: PWY-7821
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SUCCSEMIALDDEHYDROG-RXN&oldid=30645"