Difference between revisions of "PWY-5837"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-II-PWY GLUDEG-II-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1...")
(Created page with "Category:Gene == Gene Tiso_gene_10879 == * right end position: ** 5854 * transcription direction: ** POSITIVE * left end position: ** 3583 * centisome position: ** 43.5411...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-II-PWY GLUDEG-II-PWY] ==
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== Gene Tiso_gene_10879 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** 5854
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* transcription direction:
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* common name:
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** POSITIVE
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** L-glutamate degradation VII (to butanoate)
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* left end position:
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** 3583
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* centisome position:
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** 43.541138   
 
* Synonym(s):
 
* Synonym(s):
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** L-glutamate fermentation
 
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** mesaconate pathway
 
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** L-glutamate degradation VII (to butyrate)
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''2''' reactions found over '''6''' reactions in the full pathway
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* Reaction: [[RIBULP3EPIM-RXN]]
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* [[CENTFERM-PWY]]
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** Source: [[annotation-experimental_annotation]]
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** 0 associated gene:
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*** Assignment: ec-number
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* [[HYDROG-RXN]]
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** Source: [[orthology-athaliana]]
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** 1 associated gene(s):
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_4288]]
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** Source: [[orthology-esiliculosus]]
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** 2 reconstruction source(s) associated:
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** Source: [[orthology-creinhardtii]]
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*** [[annotation-in-silico_annotation]]
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== Pathways associated ==
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*** [[orthology-esiliculosus]]
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* [[P124-PWY]]
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== Reaction(s) not found ==
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* [[CALVIN-PWY]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5087 PWY-5087]
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* [[P21-PWY]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5087 PWY-5087]
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* [[PWY-5723]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
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* [[PWY-1861]]
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* [[P122-PWY]]
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* [[P185-PWY]]
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* [[NONOXIPENT-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1239}}
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{{#set: right end position=5854}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=L-glutamate degradation VII (to butanoate)}}
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{{#set: left end position=3583}}
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{{#set: common name=L-glutamate fermentation|mesaconate pathway|L-glutamate degradation VII (to butyrate)}}
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{{#set: centisome position=43.541138    }}
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{{#set: reaction found=2}}
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{{#set: reaction associated=RIBULP3EPIM-RXN}}
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{{#set: total reaction=6}}
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{{#set: pathway associated=P124-PWY|CALVIN-PWY|P21-PWY|PWY-5723|PWY-1861|P122-PWY|P185-PWY|NONOXIPENT-PWY}}
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{{#set: completion rate=33.0}}
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Revision as of 15:52, 21 March 2018

Gene Tiso_gene_10879

  • right end position:
    • 5854
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3583
  • centisome position:
    • 43.541138
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5837&oldid=30906"