Difference between revisions of "PWY-6974"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-RXN CERAMIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-RXN CERAMIDASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
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* common name:
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** 1,4-dihydroxy-2-naphthoate biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''4''' reactions found over '''7''' reactions in the full pathway
** 1 [[N-Acylsphingosine]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SPHINGOSINE]][c] '''+''' 1 [[Fatty-Acids]][c]
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* [[2.5.1.64-RXN]]
* With common name(s):
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** 2 associated gene(s):
** 1 a sphingosine ceramide[c] '''+''' 1 H2O[c] '''=>''' 1 sphingosine[c] '''+''' 1 a fatty acid[c]
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*** [[Tiso_gene_1922]]
 
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*** [[Tiso_gene_17551]]
== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
* [[Tiso_gene_14341]]
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*** [[orthology-esiliculosus]]
** [[pantograph]]-[[esiliculosus]]
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* [[ISOCHORSYN-RXN]]
== Pathways  ==
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** 2 associated gene(s):
* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11470 PWY3DJ-11470]
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*** [[Tiso_gene_14767]]
** '''3''' reactions found over '''5''' reactions in the full pathway
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*** [[Tiso_gene_17551]]
== Reconstruction information  ==
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** 3 reconstruction source(s) associated:
* Category: [[orthology]]
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*** [[annotation-in-silico_annotation]]
** Source: [[orthology-esiliculosus]]
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*** [[orthology-synechocystis]]
*** Tool: [[pantograph]]
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*** [[orthology-esiliculosus]]
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* [[NAPHTHOATE-SYN-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14257]]
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*** [[Tiso_gene_19690]]
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*** [[Tiso_gene_16145]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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* [[RXN-9310]]
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** 1 associated gene(s):
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*** [[Tiso_gene_1922]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCINYLBENZOATE-COA-LIG-RXN O-SUCCINYLBENZOATE-COA-LIG-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCINYLBENZOATE-COA-SYN-RXN O-SUCCINYLBENZOATE-COA-SYN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9311 RXN-9311]
 
== External links  ==
 
== External links  ==
* RHEA:
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* ECOCYC:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20856 20856]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5837 PWY-5837]
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
** [http://www.genome.jp/dbget-bin/www_bget?R01493 R01493]
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{{#set: taxonomic range=TAX-2}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=1,4-dihydroxy-2-naphthoate biosynthesis}}
{{#set: ec number=EC-3.5.1.23}}
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{{#set: reaction found=4}}
{{#set: gene associated=Tiso_gene_14341}}
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{{#set: total reaction=7}}
{{#set: in pathway=PWY3DJ-11470}}
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{{#set: completion rate=57.0}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:53, 21 March 2018

Pathway PWY-5837

  • taxonomic range:
  • common name:
    • 1,4-dihydroxy-2-naphthoate biosynthesis
  • Synonym(s):

Reaction(s) found

4 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links