Difference between revisions of "Tiso gene 15379"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P108-PWY P108-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7683 RXN-7683] == * direction: ** LEFT-TO-RIGHT * common name: ** phytol_kinase * ec number: **...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P108-PWY P108-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7683 RXN-7683] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** pyruvate fermentation to propanoate I
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** phytol_kinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.182 EC-2.7.1.182]
 
* Synonym(s):
 
* Synonym(s):
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** succinate-propionate fermentation pathway
 
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** pyruvate fermentation to propionate I
 
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** succinate-propanoate fermentation pathway
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[FUMHYDR-RXN]]
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** 1 [[PHYTOL]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[CDP]][c] '''+''' 1 [[CPD-7025]][c] '''+''' 1 [[PROTON]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_6720]]
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** 1 phytol[c] '''+''' 1 CTP[c] '''=>''' 1 CDP[c] '''+''' 1 phytyl monophosphate[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_3691]]
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** 6 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14722]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[manual-primary_network]]
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== Pathways  ==
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*** [[orthology-creinhardtii]]
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* [[PWY-5107]], phytol salvage pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5107 PWY-5107]
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* [[MALATE-DEH-RXN]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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** 2 associated gene(s):
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== Reconstruction information  ==
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*** [[Tiso_gene_1990]]
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* Category: [[annotation]]
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*** [[Tiso_gene_2323]]
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** Source: [[annotation-in-silico_annotation]]
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** 7 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[METHYLMALONYL-COA-MUT-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_9771]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.1.3.1-RXN 2.1.3.1-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-268 RXN0-268]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyruvate fermentation to propanoate I}}
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{{#set: common name=phytol_kinase}}
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{{#set: common name=succinate-propionate fermentation pathway|pyruvate fermentation to propionate I|succinate-propanoate fermentation pathway}}
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{{#set: ec number=EC-2.7.1.182}}
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{{#set: reaction found=3}}
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{{#set: gene associated=Tiso_gene_14722}}
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{{#set: total reaction=7}}
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{{#set: in pathway=PWY-5107}}
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{{#set: completion rate=43.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:54, 21 March 2018

Reaction RXN-7683

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phytol_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 phytol[c] + 1 CTP[c] => 1 CDP[c] + 1 phytyl monophosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5107, phytol salvage pathway: PWY-5107
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15379&oldid=31055"