Difference between revisions of "PWY-5947"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9724 RXN-9724] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6945 PWY-6945] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9724 RXN-9724] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6945 PWY-6945] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/1.3.1.77 EC-1.3.1.77]
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** cholesterol degradation to androstenedione I (cholesterol oxidase)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''17''' reactions in the full pathway
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** 2 [[NADPH]][c] '''+''' 1 [[PELARGONIDIN-CMPD]][c] '''+''' 3 [[PROTON]][c] '''=>''' 2 [[NADP]][c] '''+''' 1 [[CPD-10413]][c]
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* [[RXN-12705]]
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* With common name(s):
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** 6 associated gene(s):
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** 2 NADPH[c] '''+''' 1 pelargonidin[c] '''+''' 3 H+[c] '''=>''' 2 NADP+[c] '''+''' 1 (-)-epiafzelechin[c]
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*** [[Tiso_gene_18839]]
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*** [[Tiso_gene_5857]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_14026]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_18838]]
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* [[Tiso_gene_15272]]
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*** [[Tiso_gene_14027]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_14262]]
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* [[Tiso_gene_9504]]
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** 3 reconstruction source(s) associated:
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** [[annotation-experimental_annotation]]
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* [[PWY-6035]], 2,3-cis-flavanols biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6035 PWY-6035]
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*** [[orthology-esiliculosus]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[RXN-12710]]
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== Reconstruction information  ==
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** 5 associated gene(s):
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* Category: [[orthology]]
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*** [[Tiso_gene_17451]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_15327]]
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_3855]]
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*** [[Tiso_gene_3856]]
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*** [[Tiso_gene_10116]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12694 RXN-12694]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12702 RXN-12702]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12703 RXN-12703]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12704 RXN-12704]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12706 RXN-12706]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12707 RXN-12707]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12708 RXN-12708]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12709 RXN-12709]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12743 RXN-12743]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12744 RXN-12744]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12745 RXN-12745]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12778 RXN-12778]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12848 RXN-12848]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12849 RXN-12849]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12850 RXN-12850]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06541 R06541]
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{{#set: common name=cholesterol degradation to androstenedione I (cholesterol oxidase)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=2}}
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{{#set: ec number=EC-1.3.1.77}}
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{{#set: total reaction=17}}
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{{#set: gene associated=Tiso_gene_15272|Tiso_gene_9504}}
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{{#set: completion rate=12.0}}
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{{#set: in pathway=PWY-6035}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:54, 21 March 2018

Pathway PWY-6945

  • taxonomic range:
  • common name:
    • cholesterol degradation to androstenedione I (cholesterol oxidase)
  • Synonym(s):

Reaction(s) found

2 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5947&oldid=31107"