Difference between revisions of "RXN-10915"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17779 RXN-17779] == * direction: ** LEFT-TO-RIGHT * common name: ** Acyl-CoA dehydrogenase ** a...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15830 RXN-15830] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17779 RXN-17779] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** Acyl-CoA dehydrogenase
 +
** acyl-_dehydrogenase
 +
** acyl-CoA_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.9.3.1 EC-1.9.3.1]
+
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 4 [[Cytochromes-C-Reduced]][e] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 8 [[PROTON]][c] '''=>''' 4 [[Cytochromes-C-Oxidized]][e] '''+''' 4 [[PROTON]][e] '''+''' 2 [[WATER]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[CPD-19144]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD-19170]][c]
 
* With common name(s):
 
* With common name(s):
−
** 4 a reduced c-type cytochrome[e] '''+''' 1 oxygen[c] '''+''' 8 H+[c] '''=>''' 4 an oxidized c-type cytochrome[e] '''+''' 4 H+[e] '''+''' 2 H2O[c]
+
** 1 H+[c] '''+''' 1 (7Z)-hexadecenoyl-CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 (2E,7Z)-hexadecenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15682]]
+
* Gene: [[Tiso_gene_5449]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_18053]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_16113]]
−
* [[Tiso_gene_18580]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_7948]]
+
* Gene: [[Tiso_gene_8271]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_6475]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_8272]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_16631]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6692]], Fe(II) oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=Acyl-CoA dehydrogenase}}
−
{{#set: ec number=EC-1.9.3.1}}
+
{{#set: common name=acyl-_dehydrogenase}}
−
{{#set: gene associated=Tiso_gene_15682|Tiso_gene_18053|Tiso_gene_18580|Tiso_gene_7948}}
+
{{#set: common name=acyl-CoA_dehydrogenase}}
−
{{#set: in pathway=PWY-6692}}
+
{{#set: ec number=EC-1.3.8}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: gene associated=Tiso_gene_5449|Tiso_gene_16113|Tiso_gene_8271|Tiso_gene_6475|Tiso_gene_8272|Tiso_gene_16631}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:57, 21 March 2018

Reaction RXN-17779

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acyl-CoA dehydrogenase
    • acyl-_dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 (7Z)-hexadecenoyl-CoA[c] + 1 an oxidized electron-transfer flavoprotein[c] => 1 a reduced electron-transfer flavoprotein[c] + 1 (2E,7Z)-hexadecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10915&oldid=31413"