Difference between revisions of "Tiso gene 14181"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.99.5-RXN 1.3.99.5-RXN] == * direction: ** REVERSIBLE * common name: ** 3-oxo-5-alpha-steroid_4-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.99.5-RXN 1.3.99.5-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2870 TAX-2870]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** 3-oxo-5-alpha-steroid_4-dehydrogenase
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** vitamin E biosynthesis (tocopherols)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.1.22 EC-1.3.1.22]
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* Synonym(s):
 
* Synonym(s):
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** tocopherol biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''7''' reactions in the full pathway
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** 1 [[3-Oxo-5-Alpha-Steroids]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[3-Oxo-Delta-4-Steroids]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
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* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 a 3-oxo-5-&alpha;-steroid[c] '''+''' 1 NADP+[c] '''<=>''' 1 a 3-oxo-&Delta;4-steroid[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_18977]]
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*** [[Tiso_gene_18976]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_18328]]
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Genes have been associated with this reaction based on different elements listed below.
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** 4 reconstruction source(s) associated:
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* [[Tiso_gene_14327]]
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*** [[orthology-athaliana]]
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***AUTOMATED-NAME-MATCH
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*** [[orthology-synechocystis]]
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* [[RXN-2541]]
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* Category: [[annotation]]
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** 1 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_13582]]
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*** Tool: [[pathwaytools]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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* [[RXN-2542]]
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** 2 associated gene(s):
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*** [[Tiso_gene_11392]]
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*** [[Tiso_gene_2596]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RXN-2562]]
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** 1 associated gene(s):
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*** [[Tiso_gene_6738]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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* [[TOCOPHEROL-O-METHYLTRANSFERASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_6738]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2543 RXN-2543]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2561 RXN-2561]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ARACYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R02643 R02643]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-1422 PWY-1422]
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* UNIPROT:
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{{#set: taxonomic range=TAX-1117}}
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** [http://www.uniprot.org/uniprot/P18405 P18405]
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{{#set: taxonomic range=TAX-3041}}
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** [http://www.uniprot.org/uniprot/Q59327 Q59327]
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{{#set: taxonomic range=TAX-2870}}
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-2763}}
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{{#set: common name=3-oxo-5-alpha-steroid_4-dehydrogenase}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: ec number=EC-1.3.1.22}}
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{{#set: common name=vitamin E biosynthesis (tocopherols)}}
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{{#set: gene associated=Tiso_gene_14327}}
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{{#set: common name=tocopherol biosynthesis}}
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{{#set: in pathway=}}
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{{#set: reaction found=5}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=7}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: completion rate=71.0}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:57, 21 March 2018

Pathway PWY-1422

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links






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