Difference between revisions of "PSERTRANSAMPYR-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=QUINATEDEG-PWY QUINATEDEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.4.3.19-RXN 1.4.3.19-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=QUINATEDEG-PWY QUINATEDEG-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.4.3.19-RXN 1.4.3.19-RXN] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** quinate degradation I
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** [http://enzyme.expasy.org/EC/1.4.3.19 EC-1.4.3.19]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''1''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[GLYOX]][c]
** 5 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_5752]]
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** 1 H2O[c] '''+''' 1 glycine[c] '''+''' 1 oxygen[c] '''=>''' 1 ammonium[c] '''+''' 1 hydrogen peroxide[c] '''+''' 1 glyoxylate[c]
*** [[Tiso_gene_14718]]
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*** [[Tiso_gene_8720]]
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== Genes associated with this reaction  ==
*** [[Tiso_gene_5753]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[Tiso_gene_5619]]
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* Gene: [[Tiso_gene_13537]]
** 4 reconstruction source(s) associated:
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** Source: [[orthology-synechocystis]]
*** [[orthology-athaliana]]
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* Gene: [[Tiso_gene_16652]]
*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-synechocystis]]
*** [[manual-primary_network]]
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* Gene: [[Tiso_gene_11756]]
*** [[orthology-esiliculosus]]
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** Source: [[orthology-synechocystis]]
== Reaction(s) not found ==
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== Pathways  ==
* [http://metacyc.org/META/NEW-IMAGE?object=1.1.99.25-RXN 1.1.99.25-RXN]
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* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
* [http://metacyc.org/META/NEW-IMAGE?object=DHSHIKIMATE-DEHYDRO-RXN DHSHIKIMATE-DEHYDRO-RXN]
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** '''4''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2}}
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* RHEA:
{{#set: common name=quinate degradation I}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11532 11532]
{{#set: reaction found=1}}
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* LIGAND-RXN:
{{#set: total reaction=3}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00366 R00366]
{{#set: completion rate=33.0}}
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{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-1.4.3.19}}
 +
{{#set: gene associated=Tiso_gene_13537|Tiso_gene_16652|Tiso_gene_11756}}
 +
{{#set: in pathway=PWY-7396}}
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{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-synechocystis}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 14:58, 21 March 2018

Reaction 1.4.3.19-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7396, butanol and isobutanol biosynthesis (engineered): PWY-7396
    • 4 reactions found over 8 reactions in the full pathway

Reconstruction information

External links