Difference between revisions of "ADP-D-Ribosyl-Acceptors"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14959 RXN-14959] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoyl_synthase_mitochondri...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12540 RXN-12540] == * direction: ** LEFT-TO-RIGHT * common name: ** Fenton reaction * Synonym(s...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14959 RXN-14959] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12540 RXN-12540] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** lipoyl_synthase_mitochondrial
+
** Fenton reaction
−
** lipoyl_mitochondrial
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.8.1.8 EC-2.8.1.8]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[a-2-oxoglutarate-dehydrogenase-E2-protei]][c] '''+''' 2 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 2 [[CH33ADO]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[Unsulfurated-Sulfur-Acceptors]][c]
+
** 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[FE+2]][c] '''=>''' 1 [[CPD-12377]][c] '''+''' 1 [[OH]][c] '''+''' 1 [[FE+3]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 a reduced [2Fe-2S] ferredoxin[c] '''+''' 1 a [2-oxoglutarate-dehydrogenase E2 protein] N6-octanoyl-L-lysine[c] '''+''' 2 a sulfurated [sulfur carrier][c] '''+''' 2 S-adenosyl-L-methionine[c] '''=>''' 2 5'-deoxyadenosine[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 2 an oxidized [2Fe-2S] ferredoxin[c] '''+''' 2 L-methionine[c] '''+''' 2 an unsulfurated [sulfur carrier][c]
+
** 1 hydrogen peroxide[c] '''+''' 1 Fe2+[c] '''=>''' 1 hydroxyl radical[c] '''+''' 1 OH-[c] '''+''' 1 Fe3+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_8049]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_437]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7382]], lipoate biosynthesis and incorporation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7382 PWY-7382]
+
* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6854]], ethylene biosynthesis III (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6854 PWY-6854]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=lipoyl_synthase_mitochondrial}}
+
{{#set: common name=Fenton reaction}}
−
{{#set: common name=lipoyl_mitochondrial}}
+
{{#set: in pathway=DETOX1-PWY-1|PWY-6854}}
−
{{#set: ec number=EC-2.8.1.8}}
+
−
{{#set: gene associated=Tiso_gene_8049|Tiso_gene_437}}
+
−
{{#set: in pathway=PWY-7382}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:58, 21 March 2018

Reaction RXN-12540

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Fenton reaction
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hydrogen peroxide[c] + 1 Fe2+[c] => 1 hydroxyl radical[c] + 1 OH-[c] + 1 Fe3+[c]

Genes associated with this reaction

Pathways

  • DETOX1-PWY-1, reactive oxygen species degradation: DETOX1-PWY-1
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6854, ethylene biosynthesis III (microbes): PWY-6854
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ADP-D-Ribosyl-Acceptors&oldid=31577"