Difference between revisions of "Tiso gene 6764"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7979 RXN-7979] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** Zea-epoxidase == Reaction For...")
(Created page with "Category:Gene == Gene Tiso_gene_2973 == * right end position: ** 5764 * transcription direction: ** NEGATIVE * left end position: ** 696 * centisome position: ** 3.909234...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7979 RXN-7979] ==
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== Gene Tiso_gene_2973 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5764
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* transcription direction:
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** NEGATIVE
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* left end position:
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** 696
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* centisome position:
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** 3.909234   
 
* Synonym(s):
 
* Synonym(s):
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** Zea-epoxidase
 
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ASNSYNA-RXN]]
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** 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-131]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD1F-133]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 oxygen[c] '''+''' 1 antheraxanthin[c] '''=>''' 1 H2O[c] '''+''' 1 violaxanthin[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[ASNSYNB-RXN]]
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* [[Tiso_gene_10919]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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== Pathways  ==
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-5945]], zeaxanthin, antheraxanthin and violaxanthin interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945]
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*** Assignment: ec-number
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** Source: [[orthology-athaliana]]
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* [[PWY-5174]], capsanthin and capsorubin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5174 PWY-5174]
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** Source: [[orthology-esiliculosus]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[GLUTAMIN-RXN]]
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== Reconstruction information  ==
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** Source: [[annotation-in-silico_annotation]]
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* Category: [[orthology]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[ASPARAGINE-BIOSYNTHESIS]]
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* [[ASPARAGINESYN-PWY]]
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* [[GLUTAMINDEG-PWY]]
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* [[CITRULBIO-PWY]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=5764}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07200 R07200]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=696}}
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{{#set: common name=Zea-epoxidase}}
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{{#set: centisome position=3.909234    }}
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{{#set: gene associated=Tiso_gene_10919}}
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{{#set: reaction associated=ASNSYNA-RXN|ASNSYNB-RXN|GLUTAMIN-RXN}}
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{{#set: in pathway=PWY-5945|PWY-5174}}
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{{#set: pathway associated=ASPARAGINE-BIOSYNTHESIS|ASPARAGINESYN-PWY|GLUTAMINDEG-PWY|CITRULBIO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:59, 21 March 2018

Gene Tiso_gene_2973

  • right end position:
    • 5764
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 696
  • centisome position:
    • 3.909234
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6764&oldid=31642"