Difference between revisions of "PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** assimilatory_nitrate_reductase
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** D-galactose degradation V (Leloir pathway)
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.7.1.1 EC-1.7.1.1]
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* Synonym(s):
 
* Synonym(s):
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** Leloir pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''5''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[NITRATE]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NITRITE]][c]
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* [[ALDOSE1EPIM-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 nitrate[c] '''=>''' 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 nitrite[c]
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*** [[Tiso_gene_17734]]
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*** [[Tiso_gene_19779]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_16889]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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* [[GALACTOKIN-RXN]]
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***EC-NUMBER
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** 5 associated gene(s):
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_11795]]
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***EC-NUMBER
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*** [[Tiso_gene_12191]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_5041]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_10797]]
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* [[Tiso_gene_18918]]
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*** [[Tiso_gene_5042]]
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** IN-SILICO_ANNOTATION
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** 5 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** [[orthology-athaliana]]
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***EC-NUMBER
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*** [[orthology-creinhardtii]]
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
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*** [[annotation-experimental_annotation]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[GALACTURIDYLYLTRANS-RXN]]
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== Reconstruction information  ==
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** 1 associated gene(s):
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* Category: [[orthology]]
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*** [[Tiso_gene_2435]]
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** Source: [[orthology-creinhardtii]]
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** 3 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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*** Tool: [[pantograph]]
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*** [[orthology-esiliculosus]]
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* Category: [[manual]]
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* [[PHOSPHOGLUCMUT-RXN]]
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** Source: [[manual-primary_network]]
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** 2 associated gene(s):
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* Category: [[annotation]]
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*** [[Tiso_gene_4816]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_13477]]
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*** Tool: [[pathwaytools]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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* [[UDPGLUCEPIM-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_9823]]
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*** [[Tiso_gene_15395]]
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*** [[Tiso_gene_3236]]
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*** [[Tiso_gene_10797]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17913 17913]
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{{#set: common name=D-galactose degradation V (Leloir pathway)}}
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* LIGAND-RXN:
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{{#set: common name=Leloir pathway}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
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{{#set: reaction found=5}}
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* UNIPROT:
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{{#set: total reaction=5}}
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** [http://www.uniprot.org/uniprot/Q39607 Q39607]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q41201 Q41201]
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** [http://www.uniprot.org/uniprot/P17569 P17569]
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** [http://www.uniprot.org/uniprot/P54233 P54233]
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** [http://www.uniprot.org/uniprot/P36841 P36841]
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** [http://www.uniprot.org/uniprot/P27967 P27967]
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** [http://www.uniprot.org/uniprot/P27969 P27969]
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** [http://www.uniprot.org/uniprot/P11035 P11035]
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** [http://www.uniprot.org/uniprot/P08509 P08509]
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** [http://www.uniprot.org/uniprot/P11605 P11605]
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** [http://www.uniprot.org/uniprot/P23312 P23312]
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** [http://www.uniprot.org/uniprot/P17570 P17570]
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** [http://www.uniprot.org/uniprot/P16081 P16081]
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** [http://www.uniprot.org/uniprot/Q01170 Q01170]
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** [http://www.uniprot.org/uniprot/P39865 P39865]
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** [http://www.uniprot.org/uniprot/P11832 P11832]
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** [http://www.uniprot.org/uniprot/P39869 P39869]
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** [http://www.uniprot.org/uniprot/Q43265 Q43265]
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** [http://www.uniprot.org/uniprot/P43101 P43101]
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** [http://www.uniprot.org/uniprot/P43100 P43100]
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** [http://www.uniprot.org/uniprot/Q42497 Q42497]
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** [http://www.uniprot.org/uniprot/P39866 P39866]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=assimilatory_nitrate_reductase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.7.1.1}}
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{{#set: gene associated=Tiso_gene_16889|Tiso_gene_18918}}
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{{#set: in pathway=PWY-381}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:00, 21 March 2018

Pathway PWY66-422

  • taxonomic range:
  • common name:
    • D-galactose degradation V (Leloir pathway)
  • Synonym(s):
    • Leloir pathway

Reaction(s) found

5 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN&oldid=31737"