Difference between revisions of "CPD-11525"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=NONOXIPENT-PWY NONOXIPENT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13302 RXN-13302] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=NONOXIPENT-PWY NONOXIPENT-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13302 RXN-13302] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
* common name:
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** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
** pentose phosphate pathway (non-oxidative branch)
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* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''5''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
* [[1TRANSKETO-RXN]]
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** 1 [[CPD-14275]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-14280]][c]
** 2 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_5008]]
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** 1 (3R)-3-hydroxy-arachidoyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 trans-arachido-2-enoyl-CoA[c]
*** [[Tiso_gene_11559]]
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** 5 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
*** [[annotation-experimental_annotation]]
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== Pathways  ==
*** [[orthology-athaliana]]
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* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
*** [[annotation-in-silico_annotation]]
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** '''16''' reactions found over '''16''' reactions in the full pathway
*** [[orthology-synechocystis]]
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== Reconstruction information  ==
*** [[manual-primary_network]]
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* Category: [[annotation]]
* [[2TRANSKETO-RXN]]
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** Source: [[annotation-in-silico_annotation]]
** 2 associated gene(s):
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*** Tool: [[pathwaytools]]
*** [[Tiso_gene_11559]]
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** Source: [[annotation-experimental_annotation]]
*** [[Tiso_gene_5008]]
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*** Tool: [[pathwaytools]]
** 5 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[RIB5PISOM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18217]]
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** 5 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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* [[RIBULP3EPIM-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_4754]]
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*** [[Tiso_gene_19140]]
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*** [[Tiso_gene_10879]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[TRANSALDOL-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_17601]]
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*** [[Tiso_gene_1831]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=NONOXIPENT-PWY NONOXIPENT-PWY]
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{{#set: ec number=EC-4.2.1.134}}
{{#set: taxonomic range=TAX-2759}}
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{{#set: in pathway=PWY-7036}}
{{#set: taxonomic range=TAX-2}}
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{{#set: reconstruction category=annotation}}
{{#set: common name=pentose phosphate pathway (non-oxidative branch)}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
{{#set: reaction found=5}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: total reaction=5}}
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{{#set: completion rate=100.0}}
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Revision as of 16:03, 21 March 2018

Reaction RXN-13302

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (3R)-3-hydroxy-arachidoyl-CoA[c] => 1 H2O[c] + 1 trans-arachido-2-enoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
    • 16 reactions found over 16 reactions in the full pathway

Reconstruction information

External links