Difference between revisions of "Tiso gene 4648"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_phos...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
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** probable_phosphoribosyl-amp_cyclohydrolase
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** guanosine nucleotides degradation II
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** phosphoribosyl-amp_cyclohydrolase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.4.19 EC-3.5.4.19]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c]
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* [[GUANINE-DEAMINASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 1-(5-phospho-β-D-ribosyl)-AMP[c] '''+''' 1 H2O[c] '''=>''' 1 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
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*** [[Tiso_gene_12280]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-creinhardtii]]
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* [[Tiso_gene_5047]]
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* [[RXN-7609]]
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** IN-SILICO_ANNOTATION
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** 8 associated gene(s):
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_5911]]
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* [[Tiso_gene_11297]]
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*** [[Tiso_gene_13929]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_6640]]
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_9166]]
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_14435]]
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** [[pantograph]]-[[synechocystis]]
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*** [[Tiso_gene_14434]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_6988]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_14246]]
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== Pathways  ==
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** 3 reconstruction source(s) associated:
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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*** [[annotation-in-silico_annotation]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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*** [[orthology-creinhardtii]]
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== Reconstruction information  ==
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*** [[orthology-esiliculosus]]
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* Category: [[orthology]]
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* [[RXN0-366]]
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** Source: [[orthology-athaliana]]
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** 2 associated gene(s):
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_11910]]
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_12995]]
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*** Tool: [[pantograph]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-synechocystis]]
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*** [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
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* [[RXN0-901]]
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** Source: [[orthology-esiliculosus]]
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** 1 associated gene(s):
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_11775]]
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* Category: [[manual]]
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** 2 reconstruction source(s) associated:
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** Source: [[manual-primary_network]]
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*** [[orthology-athaliana]]
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* Category: [[annotation]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20049 20049]
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{{#set: taxonomic range=TAX-3193}}
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* LIGAND-RXN:
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{{#set: common name=guanosine nucleotides degradation II}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04037 R04037]
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{{#set: reaction found=4}}
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* UNIPROT:
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/P44434 P44434]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q9JVH6 Q9JVH6]
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** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
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** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
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** [http://www.uniprot.org/uniprot/Q02130 Q02130]
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** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
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** [http://www.uniprot.org/uniprot/Q58825 Q58825]
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** [http://www.uniprot.org/uniprot/O28329 O28329]
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** [http://www.uniprot.org/uniprot/O34912 O34912]
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** [http://www.uniprot.org/uniprot/P0A5B3 P0A5B3]
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** [http://www.uniprot.org/uniprot/Q9HUB7 Q9HUB7]
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** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
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** [http://www.uniprot.org/uniprot/Q9K0H5 Q9K0H5]
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** [http://www.uniprot.org/uniprot/O67780 O67780]
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** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
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** [http://www.uniprot.org/uniprot/Q50837 Q50837]
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** [http://www.uniprot.org/uniprot/Q53158 Q53158]
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** [http://www.uniprot.org/uniprot/P45353 P45353]
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** [http://www.uniprot.org/uniprot/Q12670 Q12670]
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** [http://www.uniprot.org/uniprot/P00815 P00815]
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** [http://www.uniprot.org/uniprot/P07685 P07685]
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** [http://www.uniprot.org/uniprot/O59667 O59667]
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** [http://www.uniprot.org/uniprot/Q9X7C3 Q9X7C3]
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** [http://www.uniprot.org/uniprot/O82768 O82768]
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** [http://www.uniprot.org/uniprot/P10367 P10367]
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** [http://www.uniprot.org/uniprot/P06989 P06989]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=probable_phosphoribosyl-amp_cyclohydrolase}}
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{{#set: common name=phosphoribosyl-amp_cyclohydrolase}}
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{{#set: ec number=EC-3.5.4.19}}
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{{#set: gene associated=Tiso_gene_5047|Tiso_gene_11297}}
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{{#set: in pathway=HISTSYN-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:03, 21 March 2018

Pathway PWY-6606

  • taxonomic range:
  • common name:
    • guanosine nucleotides degradation II
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4648&oldid=32058"