Difference between revisions of "RXN-6382"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_694 == * left end position: ** 27055 * transcription direction: ** POSITIVE * right end position: ** 29764 * centisome position: ** 90.7398...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_phos...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_694 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTCYCLOHYD-RXN HISTCYCLOHYD-RXN] ==
−
* left end position:
+
* direction:
−
** 27055
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** probable_phosphoribosyl-amp_cyclohydrolase
−
* right end position:
+
** phosphoribosyl-amp_cyclohydrolase
−
** 29764
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/3.5.4.19 EC-3.5.4.19]
−
** 90.73987   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ADENYL-KIN-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[WATER]][c] '''+''' 1 [[PHOSPHORIBOSYL-AMP]][c] '''=>''' 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c]
−
***ec-number
+
* With common name(s):
−
== Pathways associated ==
+
** 1 H2O[c] '''+''' 1 1-(5-phospho-β-D-ribosyl)-AMP[c] '''=>''' 1 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
−
* [[PWY-7219]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_5047]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_11297]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
== Pathways ==
 +
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=27055}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20049 20049]
−
{{#set: right end position=29764}}
+
* LIGAND-RXN:
−
{{#set: centisome position=90.73987    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04037 R04037]
−
{{#set: reaction associated=ADENYL-KIN-RXN}}
+
* UNIPROT:
−
{{#set: pathway associated=PWY-7219}}
+
** [http://www.uniprot.org/uniprot/P44434 P44434]
 +
** [http://www.uniprot.org/uniprot/Q9JVH6 Q9JVH6]
 +
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
 +
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
 +
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
 +
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
 +
** [http://www.uniprot.org/uniprot/Q58825 Q58825]
 +
** [http://www.uniprot.org/uniprot/O28329 O28329]
 +
** [http://www.uniprot.org/uniprot/O34912 O34912]
 +
** [http://www.uniprot.org/uniprot/P0A5B3 P0A5B3]
 +
** [http://www.uniprot.org/uniprot/Q9HUB7 Q9HUB7]
 +
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
 +
** [http://www.uniprot.org/uniprot/Q9K0H5 Q9K0H5]
 +
** [http://www.uniprot.org/uniprot/O67780 O67780]
 +
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
 +
** [http://www.uniprot.org/uniprot/Q50837 Q50837]
 +
** [http://www.uniprot.org/uniprot/Q53158 Q53158]
 +
** [http://www.uniprot.org/uniprot/P45353 P45353]
 +
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 +
** [http://www.uniprot.org/uniprot/P00815 P00815]
 +
** [http://www.uniprot.org/uniprot/P07685 P07685]
 +
** [http://www.uniprot.org/uniprot/O59667 O59667]
 +
** [http://www.uniprot.org/uniprot/Q9X7C3 Q9X7C3]
 +
** [http://www.uniprot.org/uniprot/O82768 O82768]
 +
** [http://www.uniprot.org/uniprot/P10367 P10367]
 +
** [http://www.uniprot.org/uniprot/P06989 P06989]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=probable_phosphoribosyl-amp_cyclohydrolase}}
 +
{{#set: common name=phosphoribosyl-amp_cyclohydrolase}}
 +
{{#set: ec number=EC-3.5.4.19}}
 +
{{#set: gene associated=Tiso_gene_5047|Tiso_gene_11297}}
 +
{{#set: in pathway=HISTSYN-PWY}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:03, 21 March 2018

Reaction HISTCYCLOHYD-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • probable_phosphoribosyl-amp_cyclohydrolase
    • phosphoribosyl-amp_cyclohydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-6382&oldid=32064"