Difference between revisions of "Spliced-tRNA-precursor"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6343 PWY-6343] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Gene == Gene Tiso_gene_19098 == * right end position: ** 2494 * transcription direction: ** POSITIVE * left end position: ** 1080 * centisome position: ** 41.7795...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6343 PWY-6343] ==
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== Gene Tiso_gene_19098 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 2494
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* common name:
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* transcription direction:
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** ferulate degradation
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** POSITIVE
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* left end position:
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** 1080
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* centisome position:
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** 41.7795   
 
* Synonym(s):
 
* Synonym(s):
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** ferulic acid degradation
 
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** vanillin biosynthesis II
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''1''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[ATPASE-RXN]]
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* [[6.2.1.34-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_12275]]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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*** [[Tiso_gene_14183]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[orthology-athaliana]]
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* Reaction: [[RXN-12195]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.2.41-RXN 4.1.2.41-RXN]
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* Reaction: [[RXN-12196]]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.101-RXN 4.2.1.101-RXN]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-5462]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: right end position=2494}}
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{{#set: common name=ferulate degradation}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ferulic acid degradation|vanillin biosynthesis II}}
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{{#set: left end position=1080}}
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{{#set: reaction found=1}}
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{{#set: centisome position=41.7795    }}
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{{#set: total reaction=3}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: completion rate=33.0}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}

Revision as of 15:03, 21 March 2018

Gene Tiso_gene_19098

  • right end position:
    • 2494
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1080
  • centisome position:
    • 41.7795
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Spliced-tRNA-precursor&oldid=32081"