Difference between revisions of "PWY-7797"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-ARGININE-DEIMINASE-RXN PROTEIN-ARGININE-DEIMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OROTIDINE-5-PHOSPHATE OROTIDINE-5-PHOSPHATE] == * smiles: ** C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-ARGININE-DEIMINASE-RXN PROTEIN-ARGININE-DEIMINASE-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OROTIDINE-5-PHOSPHATE OROTIDINE-5-PHOSPHATE] ==
* direction:
+
* smiles:
** LEFT-TO-RIGHT
+
** C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C(C(=O)[O-])=CC(=O)NC(=O)2))
 
* common name:
 
* common name:
** peptidylarginine_deiminase_(modular_protein)
+
** orotidine 5'-phosphate
* ec number:
+
* inchi key:
** [http://enzyme.expasy.org/EC/3.5.3.15 EC-3.5.3.15]
+
** InChIKey=KYOBSHFOBAOFBF-XVFCMESISA-K
 +
* molecular weight:
 +
** 365.17   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
* [[orPDC]]
** 1 [[WATER]][c] '''+''' 1 [[Protein-L-Arginines]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROTEIN-L-CITRULLINE]][c]
+
* [[OROTPDECARB-RXN]]
* With common name(s):
+
== Reaction(s) known to produce the compound ==
** 1 H2O[c] '''+''' 1 a [protein]-L-arginine[c] '''=>''' 1 ammonium[c] '''+''' 1 a [protein]-L-citrulline[c]
+
== Reaction(s) of unknown directionality ==
 
+
* [[OROPRIBTRANS-RXN]]
== Genes associated with this reaction  ==
+
* [[orPRT]]
Genes have been associated with this reaction based on different elements listed below.
+
* [[Tiso_gene_19262]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_16344]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
== Pathways  ==
+
* [[PWY-4921]], protein citrullination: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4921 PWY-4921]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[annotation]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
* CAS : 2149-82-8
** [http://www.genome.jp/dbget-bin/www_bget?R02621 R02621]
+
* BIGG : orot5p
* UNIPROT:
+
* PUBCHEM:
** [http://www.uniprot.org/uniprot/Q08642 Q08642]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46878393 46878393]
** [http://www.uniprot.org/uniprot/P20717 P20717]
+
* HMDB : HMDB00218
** [http://www.uniprot.org/uniprot/P70708 P70708]
+
* LIGAND-CPD:
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C01103 C01103]
{{#set: common name=peptidylarginine_deiminase_(modular_protein)}}
+
* CHEBI:
{{#set: ec number=EC-3.5.3.15}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57538 57538]
{{#set: gene associated=Tiso_gene_19262|Tiso_gene_16344}}
+
* METABOLIGHTS : MTBLC57538
{{#set: in pathway=PWY-4921}}
+
{{#set: smiles=C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C(C(=O)[O-])=CC(=O)NC(=O)2))}}
{{#set: reconstruction category=annotation}}
+
{{#set: common name=orotidine 5'-phosphate}}
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: inchi key=InChIKey=KYOBSHFOBAOFBF-XVFCMESISA-K}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: molecular weight=365.17    }}
 +
{{#set: consumed by=orPDC|OROTPDECARB-RXN}}
 +
{{#set: reversible reaction associated=OROPRIBTRANS-RXN|orPRT}}

Revision as of 16:03, 21 March 2018

Metabolite OROTIDINE-5-PHOSPHATE

  • smiles:
    • C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C(C(=O)[O-])=CC(=O)NC(=O)2))
  • common name:
    • orotidine 5'-phosphate
  • inchi key:
    • InChIKey=KYOBSHFOBAOFBF-XVFCMESISA-K
  • molecular weight:
    • 365.17
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 2149-82-8
  • BIGG : orot5p
  • PUBCHEM:
  • HMDB : HMDB00218
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC57538
"C(OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C(C(=O)[O-])=CC(=O)NC(=O)2))" cannot be used as a page name in this wiki.