Difference between revisions of "Tiso gene 7213"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-3-DIHYDRODIPICOLINATE 2-3-DIHYDRODIPICOLINATE] == * smiles: ** C1(CC(N=C(C=1)C(=O)[O-])C(=O)[...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-3-DIHYDRODIPICOLINATE 2-3-DIHYDRODIPICOLINATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANINE-DEAMINASE-RXN GUANINE-DEAMINASE-RXN] ==
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* smiles:
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* direction:
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** C1(CC(N=C(C=1)C(=O)[O-])C(=O)[O-])
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=UWOCFOFVIBZJGH-YFKPBYRVSA-L
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* common name:
 
* common name:
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** (S)-2,3-dihydrodipicolinate
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** ORF
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* molecular weight:
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* ec number:
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** 167.121   
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** [http://enzyme.expasy.org/EC/3.5.4.3 EC-3.5.4.3]
 
* Synonym(s):
 
* Synonym(s):
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** 2,3-di-H-dipicolinate
 
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** L-2,3-dihydrodipicolinate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[R02292]]
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** 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GUANINE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHINE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 guanine[c] '''=>''' 1 ammonium[c] '''+''' 1 xanthine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_12280]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
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** '''4''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
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** '''7''' reactions found over '''24''' reactions in the full pathway
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* [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460228 5460228]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14665 14665]
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* CHEMSPIDER:
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* LIGAND-RXN:
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** [http://www.chemspider.com/Chemical-Structure.4573840.html 4573840]
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** [http://www.genome.jp/dbget-bin/www_bget?R01676 R01676]
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* CHEBI:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=30620 30620]
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{{#set: common name=ORF}}
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* LIGAND-CPD:
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{{#set: ec number=EC-3.5.4.3}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03340 C03340]
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{{#set: gene associated=Tiso_gene_12280}}
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* HMDB : HMDB12247
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{{#set: in pathway=P164-PWY|PWY-6608|PWY-5497|PWY-6606}}
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{{#set: smiles=C1(CC(N=C(C=1)C(=O)[O-])C(=O)[O-])}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: inchi key=InChIKey=UWOCFOFVIBZJGH-YFKPBYRVSA-L}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation}}
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{{#set: common name=(S)-2,3-dihydrodipicolinate}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: molecular weight=167.121    }}
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{{#set: common name=2,3-di-H-dipicolinate|L-2,3-dihydrodipicolinate}}
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{{#set: produced by=R02292}}
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Revision as of 16:04, 21 March 2018

Reaction GUANINE-DEAMINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 H+[c] + 1 guanine[c] => 1 ammonium[c] + 1 xanthine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 4 reactions found over 17 reactions in the full pathway
  • PWY-6608, guanosine nucleotides degradation III: PWY-6608
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
    • 7 reactions found over 24 reactions in the full pathway
  • PWY-6606, guanosine nucleotides degradation II: PWY-6606
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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