Difference between revisions of "DGTUP"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-1028 CPD0-1028] == * smiles: ** CC(=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7658 RXN-7658] == * direction: ** REVERSIBLE * common name: ** geranylgeranyl_diphosphate_reduc...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-1028 CPD0-1028] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7658 RXN-7658] ==
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* smiles:
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* direction:
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** CC(=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-])C
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** REVERSIBLE
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* inchi key:
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** InChIKey=OINNEUNVOZHBOX-KWBDAJKESA-K
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* common name:
 
* common name:
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** 2-cis,6-trans,10-trans-geranylgeranyl diphosphate
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** geranylgeranyl_diphosphate_reductase
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* molecular weight:
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** 447.424   
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* Synonym(s):
 
* Synonym(s):
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** di-trans,poly-cis-geranylgeranyl diphosphate
 
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** ω,E,E,Z-geranylgeranyl diphosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[CPD-7002]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c]
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* [[RXN-13323]]
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* With common name(s):
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* [[RXN0-5180]]
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** 1 dihydrogeranylgeranyl diphosphate[c] '''+''' 1 NADP+[c] '''<=>''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 geranylgeranyl diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_2613]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245826 25245826]
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** [http://www.genome.jp/dbget-bin/www_bget?R08754 R08754]
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* CHEBI:
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{{#set: direction=REVERSIBLE}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62639 62639]
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{{#set: common name=geranylgeranyl_diphosphate_reductase}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_2613}}
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** [http://www.genome.jp/dbget-bin/www_bget?C11356 C11356]
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{{#set: in pathway=PWY-5063}}
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{{#set: smiles=CC(=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-])C}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=OINNEUNVOZHBOX-KWBDAJKESA-K}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: common name=2-cis,6-trans,10-trans-geranylgeranyl diphosphate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=447.424    }}
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{{#set: common name=di-trans,poly-cis-geranylgeranyl diphosphate|&omega;,E,E,Z-geranylgeranyl diphosphate}}
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{{#set: reversible reaction associated=RXN-13323|RXN0-5180}}
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Revision as of 16:04, 21 March 2018

Reaction RXN-7658

  • direction:
    • REVERSIBLE
  • common name:
    • geranylgeranyl_diphosphate_reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dihydrogeranylgeranyl diphosphate[c] + 1 NADP+[c] <=> 1 H+[c] + 1 NADPH[c] + 1 geranylgeranyl diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5063, phytyl diphosphate biosynthesis: PWY-5063
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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