Difference between revisions of "DNA-Cytosines"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_82 == * left end position: ** 38006 * transcription direction: ** POSITIVE * right end position: ** 41871 * centisome position: ** 80.48367...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5472 RXN-5472] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_82 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5472 RXN-5472] ==
−
* left end position:
+
* direction:
−
** 38006
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* ec number:
−
** POSITIVE
+
** [http://enzyme.expasy.org/EC/2.4.1.256 EC-2.4.1.256]
−
* right end position:
+
−
** 41871
+
−
* centisome position:
+
−
** 80.48367   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RIBOKIN-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[CPD-5170]][c] '''+''' 1 [[CPD-166]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-18076]][c] '''+''' 1 [[DOLICHOLP]][c]
−
***ec-number
+
* With common name(s):
−
* [[RXN-14223]]
+
** 1 α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl β-D-glucosyl phosphate[c] '''=>''' 1 H+[c] '''+''' 1 α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl phosphate[c]
−
** in-silico_annotation
+
 
−
***ec-number
+
== Genes associated with this reaction  ==
−
== Pathways associated ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[RIBOKIN-PWY]]
+
* Gene: [[Tiso_gene_15050]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
 +
** '''19''' reactions found over '''19''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=38006}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29546 29546]
−
{{#set: right end position=41871}}
+
* LIGAND-RXN:
−
{{#set: centisome position=80.48367    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R06264 R06264]
−
{{#set: reaction associated=RIBOKIN-RXN|RXN-14223}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: pathway associated=RIBOKIN-PWY}}
+
{{#set: ec number=EC-2.4.1.256}}
 +
{{#set: gene associated=Tiso_gene_15050}}
 +
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:05, 21 March 2018

Reaction RXN-5472

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 a dolichyl β-D-glucosyl phosphate[c] => 1 H+[c] + 1 α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 a dolichyl phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DNA-Cytosines&oldid=32289"