Difference between revisions of "Tiso gene 7507"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4041 PWY-4041] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8022 RXN-8022] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** Crtlb ** phytoene desaturase (...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4041 PWY-4041] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8022 RXN-8022] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
−
* common name:
+
−
** γ-glutamyl cycle
+
 
* Synonym(s):
 
* Synonym(s):
−
** glutathione metabolism
+
** Crtlb
 +
** phytoene desaturase (ambiguous)
 +
** 2-step phytoene desaturase (ambiguous)
 +
** two-step phytoene desaturase (ambiguous)
 +
** CrtI (ambiguous)
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''5''' reactions found over '''6''' reactions in the full pathway
+
* With identifiers:
−
* [[5-OXOPROLINASE-ATP-HYDROLYSING-RXN]]
+
** 1 [[CPD1F-98]][c] '''+''' 1 [[Acceptor]][c] '''=>''' 1 [[Donor-H2]][c] '''+''' 1 [[NEUROSPORENE]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_3358]]
+
** 1 all-trans-ζ-carotene[c] '''+''' 1 an oxidized electron acceptor[c] '''=>''' 1 a reduced electron acceptor[c] '''+''' 1 all-trans neurosporene[c]
−
*** [[Tiso_gene_3359]]
+
 
−
** 4 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[annotation-in-silico_annotation]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[orthology-athaliana]]
+
* Gene: [[Tiso_gene_7142]]
−
*** [[orthology-creinhardtii]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[orthology-esiliculosus]]
+
== Pathways  ==
−
* [[GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN]]
+
* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
−
** 2 associated gene(s):
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
*** [[Tiso_gene_1510]]
+
== Reconstruction information  ==
−
*** [[Tiso_gene_1247]]
+
* Category: [[orthology]]
−
** 2 reconstruction source(s) associated:
+
** Source: [[orthology-esiliculosus]]
−
*** [[annotation-in-silico_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[orthology-esiliculosus]]
+
−
* [[GLUTATHIONESYN-PWY]]
+
−
** 0 associated gene:
+
−
* [[RXN-6601]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_12321]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[RXN-6622]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_2704]]
+
−
*** [[Tiso_gene_860]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-synechocystis]]
+
−
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33208}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-4751}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30614 30614]
−
{{#set: common name=γ-glutamyl cycle}}
+
* LIGAND-RXN:
−
{{#set: common name=glutathione metabolism}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04798 R04798]
−
{{#set: reaction found=5}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: total reaction=6}}
+
{{#set: common name=Crtlb|phytoene desaturase (ambiguous)|2-step phytoene desaturase (ambiguous)|two-step phytoene desaturase (ambiguous)|CrtI (ambiguous)}}
−
{{#set: completion rate=83.0}}
+
{{#set: gene associated=Tiso_gene_7142}}
 +
{{#set: in pathway=PWY-6287}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 15:06, 21 March 2018

Reaction RXN-8022

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):
    • Crtlb
    • phytoene desaturase (ambiguous)
    • 2-step phytoene desaturase (ambiguous)
    • two-step phytoene desaturase (ambiguous)
    • CrtI (ambiguous)

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-ζ-carotene[c] + 1 an oxidized electron acceptor[c] => 1 a reduced electron acceptor[c] + 1 all-trans neurosporene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6287, neurosporene biosynthesis: PWY-6287
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7507&oldid=32378"