Difference between revisions of "PWY-7559"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5289 RXN0-5289] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.1...")
(Created page with "Category:Gene == Gene Tiso_gene_18870 == * right end position: ** 2742 * transcription direction: ** POSITIVE * left end position: ** 10 * centisome position: ** 0.3642987...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5289 RXN0-5289] ==
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== Gene Tiso_gene_18870 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 2742
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
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** POSITIVE
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* left end position:
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** 10
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* centisome position:
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** 0.36429873   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.4.16.4-RXN]]
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** 1 [[GLYCERATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[TARTRONATE-S-ALD]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 D-glycerate[c] '''+''' 1 NAD+[c] '''<=>''' 1 tartronate semialdehyde[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
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* Reaction: [[BETA-LACTAMASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-11065]]
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* [[Tiso_gene_777]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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*** Assignment: ec-number
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* [[Tiso_gene_91]]
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* Reaction: [[RXN-11302]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** Assignment: ec-number
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* [[GLYCOLATEMET-PWY]], glycolate and glyoxylate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLATEMET-PWY GLYCOLATEMET-PWY]
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* Reaction: [[RXN-11351]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* Category: [[orthology]]
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* Reaction: [[RXN-16649]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16659]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6471]]
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* [[PWY0-1586]]
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* [[PWY-5265]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=2742}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01745 R01745]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=10}}
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{{#set: ec number=EC-1.1.1}}
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{{#set: centisome position=0.36429873    }}
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{{#set: gene associated=Tiso_gene_777|Tiso_gene_91}}
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{{#set: reaction associated=3.4.16.4-RXN|BETA-LACTAMASE-RXN|RXN-11065|RXN-11302|RXN-11351|RXN-16649|RXN-16659}}
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{{#set: in pathway=GLYCOLATEMET-PWY}}
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{{#set: pathway associated=PWY-6471|PWY0-1586|PWY-5265}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:06, 21 March 2018

Gene Tiso_gene_18870

  • right end position:
    • 2742
  • transcription direction:
    • POSITIVE
  • left end position:
    • 10
  • centisome position:
    • 0.36429873
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7559&oldid=32413"