Difference between revisions of "CYSTEINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTUP GTUP] == * direction: ** LEFT-TO-RIGHT * common name: ** GTP:uridine 5'-phosphotransferase * S...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1882 RXN-1882] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/5.1.3...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTUP GTUP] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1882 RXN-1882] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
* ec number:
−
** GTP:uridine 5'-phosphotransferase
+
** [http://enzyme.expasy.org/EC/5.1.3.18 EC-5.1.3.18]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[URIDINE]][c] '''+''' 1.0 [[GTP]][c] '''=>''' 1.0 [[GDP]][c] '''+''' 1.0 [[UMP]][c] '''+''' 1.0 [[PROTON]][c]
+
** 1 [[GDP-MANNOSE]][c] '''<=>''' 1 [[GDP-L-GALACTOSE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 uridine[c] '''+''' 1.0 GTP[c] '''=>''' 1.0 GDP[c] '''+''' 1.0 UMP[c] '''+''' 1.0 H+[c]
+
** 1 GDP-&alpha;-D-mannose[c] '''<=>''' 1 GDP-&beta;-L-galactose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14474]]
+
* Gene: [[Tiso_gene_6621]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_20134]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY4FS-12]], VTC2 cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-12 PWY4FS-12]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY4FS-13]], extended VTC2 cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-13 PWY4FS-13]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5115]], GDP-L-galactose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5115 PWY-5115]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=GTP:uridine 5'-phosphotransferase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11144 11144]
−
{{#set: gene associated=Tiso_gene_14474|Tiso_gene_20134}}
+
* LIGAND-RXN:
−
{{#set: in pathway=}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00889 R00889]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: ec number=EC-5.1.3.18}}
 +
{{#set: gene associated=Tiso_gene_6621}}
 +
{{#set: in pathway=PWY4FS-12|PWY4FS-13|PWY-5115|PWY-882}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Revision as of 16:07, 21 March 2018

Reaction RXN-1882

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP-α-D-mannose[c] <=> 1 GDP-β-L-galactose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY4FS-12, VTC2 cycle: PWY4FS-12
    • 1 reactions found over 2 reactions in the full pathway
  • PWY4FS-13, extended VTC2 cycle: PWY4FS-13
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5115, GDP-L-galactose biosynthesis: PWY-5115
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-882, L-ascorbate biosynthesis I (L-galactose pathway): PWY-882
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




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