Difference between revisions of "Tiso gene 1541"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3052 TAX-3052...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-186801]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3052 TAX-3052]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-68336]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
 
* common name:
 
* common name:
−
** pyruvate fermentation to butanol I
+
** reductive TCA cycle I
 
* Synonym(s):
 
* Synonym(s):
 +
** reductive tricarboxylic acid cycle
 +
** reductive tricarboxylic acid pathway
 +
** reductive citric acid cycle
 +
** reverse citric acid cycle
 +
** carbon fixation
 +
** CO2 fixation
 +
** reductive carboxylic acid cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''4''' reactions found over '''8''' reactions in the full pathway
+
  '''7''' reactions found over '''12''' reactions in the full pathway
−
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
+
* [[ACONITATEDEHYDR-RXN]]
−
** 3 associated gene(s):
+
** 1 associated gene(s):
−
*** [[Tiso_gene_16181]]
+
*** [[Tiso_gene_13007]]
−
*** [[Tiso_gene_15327]]
+
** 3 reconstruction source(s) associated:
−
*** [[Tiso_gene_17451]]
+
*** [[annotation-experimental_annotation]]
−
** 4 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-athaliana]]
+
−
*** [[orthology-creinhardtii]]
+
 
*** [[orthology-synechocystis]]
 
*** [[orthology-synechocystis]]
−
*** [[orthology-esiliculosus]]
+
* [[ACONITATEHYDR-RXN]]
−
* [[RXN-11662]]
+
** 1 associated gene(s):
−
** 7 associated gene(s):
+
*** [[Tiso_gene_13007]]
−
*** [[Tiso_gene_5857]]
+
** 2 reconstruction source(s) associated:
−
*** [[Tiso_gene_16703]]
+
*** [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_14027]]
+
−
*** [[Tiso_gene_14262]]
+
−
*** [[Tiso_gene_14026]]
+
−
*** [[Tiso_gene_18838]]
+
−
*** [[Tiso_gene_18839]]
+
−
** 5 reconstruction source(s) associated:
+
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
−
*** [[orthology-athaliana]]
+
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_3691]]
 +
*** [[Tiso_gene_6720]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-creinhardtii]]
 +
* [[ISOCITDEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_18262]]
 +
*** [[Tiso_gene_10809]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[RXN-11667]]
+
* [[MALATE-DEH-RXN]]
−
** 1 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Tiso_gene_5857]]
+
*** [[Tiso_gene_2323]]
−
** 1 reconstruction source(s) associated:
+
*** [[Tiso_gene_1990]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
−
* [[RXN-161]]
+
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PEPSYNTH-RXN]]
 
** 0 associated gene:
 
** 0 associated gene:
−
** 1 reconstruction source(s) associated:
+
** 2 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_15846]]
 +
*** [[Tiso_gene_11866]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=BUTANAL-DEHYDROGENASE-RXN BUTANAL-DEHYDROGENASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ATP-CITRATE-PRO-S--LYASE-RXN ATP-CITRATE-PRO-S--LYASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=ENZRXN-201-RXN ENZRXN-201-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
 
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
 
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-186801}}
+
{{#set: taxonomic range=TAX-3052}}
−
{{#set: common name=pyruvate fermentation to butanol I}}
+
{{#set: taxonomic range=TAX-1224}}
−
{{#set: reaction found=4}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: total reaction=8}}
+
{{#set: taxonomic range=TAX-68336}}
−
{{#set: completion rate=50.0}}
+
{{#set: taxonomic range=TAX-200783}}
 +
{{#set: common name=reductive TCA cycle I}}
 +
{{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
 +
{{#set: reaction found=7}}
 +
{{#set: total reaction=12}}
 +
{{#set: completion rate=58.0}}

Revision as of 15:08, 21 March 2018

Pathway P23-PWY

  • taxonomic range:
  • common name:
    • reductive TCA cycle I
  • Synonym(s):
    • reductive tricarboxylic acid cycle
    • reductive tricarboxylic acid pathway
    • reductive citric acid cycle
    • reverse citric acid cycle
    • carbon fixation
    • CO2 fixation
    • reductive carboxylic acid cycle

Reaction(s) found

7 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1541&oldid=32574"