Difference between revisions of "CPD-706"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10781 RXN-10781] == * direction: ** LEFT-TO-RIGHT * common name: ** 5-hydroxytryptophol dehydro...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10781 RXN-10781] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-200918]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* common name:
 
* common name:
** 5-hydroxytryptophol dehydrogenase
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** L-ornithine degradation II (Stickland reaction)
** polyketide_synthase
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''4''' reactions found over '''9''' reactions in the full pathway
** 1 [[NADH]][c] '''+''' 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-11671]][c] '''+''' 1 [[NAD]][c]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 NADH[c] '''+''' 1 5-hydroxyindole acetaldehyde[c] '''+''' 1 H+[c] '''=>''' 1 5-hydroxytryptophol[c] '''+''' 1 NAD+[c]
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*** [[Tiso_gene_11231]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[orthology-synechocystis]]
Genes have been associated with this reaction based on different elements listed below.
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* [[PROLINE-RACEMASE-RXN]]
* [[Tiso_gene_6562]]
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** 1 associated gene(s):
** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_13061]]
***EC-NUMBER
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** 1 reconstruction source(s) associated:
* [[Tiso_gene_7649]]
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*** [[annotation-in-silico_annotation]]
** IN-SILICO_ANNOTATION
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* [[PYRROLINECARBREDUCT-RXN]]
***EC-NUMBER
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** 4 associated gene(s):
* [[Tiso_gene_5424]]
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*** [[Tiso_gene_8625]]
** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_20218]]
***EC-NUMBER
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*** [[Tiso_gene_19254]]
* [[Tiso_gene_5425]]
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*** [[Tiso_gene_17059]]
** IN-SILICO_ANNOTATION
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** 4 reconstruction source(s) associated:
***EC-NUMBER
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*** [[annotation-experimental_annotation]]
* [[Tiso_gene_6563]]
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*** [[manual-primary_network]]
** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
***EC-NUMBER
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*** [[orthology-esiliculosus]]
== Pathways  ==
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* [[SPONTPRO-RXN]]
* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
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** 0 associated gene:
** '''6''' reactions found over '''7''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
* Category: [[annotation]]
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*** [[annotation-experimental_annotation]]
** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=24-DIAMINOPENTANOATE-DEHYDROGENASE-RXN 24-DIAMINOPENTANOATE-DEHYDROGENASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=AKPTHIOL-RXN AKPTHIOL-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-RACEMASE-RXN ORNITHINE-RACEMASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ORNMUTST-RXN ORNMUTST-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PRDABST-RXN PRDABST-RXN]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-200918}}
{{#set: common name=5-hydroxytryptophol dehydrogenase}}
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{{#set: taxonomic range=TAX-201174}}
{{#set: common name=polyketide_synthase}}
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{{#set: taxonomic range=TAX-1239}}
{{#set: common name=ORF}}
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{{#set: common name=L-ornithine degradation II (Stickland reaction)}}
{{#set: ec number=EC-1.1.1.1}}
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{{#set: reaction found=4}}
{{#set: gene associated=Tiso_gene_6562|Tiso_gene_7649|Tiso_gene_5424|Tiso_gene_5425|Tiso_gene_6563}}
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{{#set: total reaction=9}}
{{#set: in pathway=PWY-6313}}
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{{#set: completion rate=44.0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:08, 21 March 2018

Pathway PWY-6344

Reaction(s) found

4 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links