Difference between revisions of "ISPH2-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10699 RXN-10699] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18203 RXN-18203] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10699 RXN-10699] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18203 RXN-18203] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** acetyl-_c-acetyltransferase
 
** 3-ketoacyl-_thiolase
 
** thiolase
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CO-A]][c] '''+''' 1 [[CPD-11520]][c] '''=>''' 1 [[CPD-11521]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[CPD-19488]][c] '''=>''' 1 [[CPDQT-30]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
** 1 coenzyme A[c] '''+''' 1 OPC8-3-ketoacyl-CoA[c] '''=>''' 1 OPC6-CoA[c] '''+''' 1 acetyl-CoA[c]
+
** 1 H+[c] '''+''' 1 3-isopropyl-9-(methylthio)-2-oxononanoate[c] '''=>''' 1 9-(methylthio)-2-oxononanoate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_3855]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_15327]]
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_17451]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_10116]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_3856]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
+
* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450]
** '''15''' reactions found over '''19''' reactions in the full pathway
+
** '''10''' reactions found over '''30''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: in pathway=PWYQT-4450}}
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: common name=thiolase}}
+
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: gene associated=Tiso_gene_3855|Tiso_gene_15327|Tiso_gene_17451|Tiso_gene_10116|Tiso_gene_3856}}
+
{{#set: in pathway=PWY-735}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:10, 21 March 2018

Reaction RXN-18203

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 3-isopropyl-9-(methylthio)-2-oxononanoate[c] => 1 9-(methylthio)-2-oxononanoate[c] + 1 CO2[c]

Genes associated with this reaction

Pathways

  • PWYQT-4450, aliphatic glucosinolate biosynthesis, side chain elongation cycle: PWYQT-4450
    • 10 reactions found over 30 reactions in the full pathway

Reconstruction information

External links