Difference between revisions of "Tiso gene 18369"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE-DEHYDROGENASE-RXN SARCOSINE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Gene == Gene Tiso_gene_20348 == * right end position: ** 589 * transcription direction: ** POSITIVE * left end position: ** 224 * centisome position: ** 15.11471...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SARCOSINE-DEHYDROGENASE-RXN SARCOSINE-DEHYDROGENASE-RXN] ==
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== Gene Tiso_gene_20348 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 589
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* common name:
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* transcription direction:
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** sarcosine_dehydrogenase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.5.8.3 EC-1.5.8.3]
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** 224
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* centisome position:
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** 15.11471   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[KDO-8PSYNTH-RXN]]
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** 1 [[ETF-Oxidized]][c] '''+''' 1 [[SARCOSINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[ETF-Reduced]][c] '''+''' 1 [[FORMALDEHYDE]][c]
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* With common name(s):
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** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 sarcosine[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 glycine[c] '''+''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 formaldehyde[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14788]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[CRNFORCAT-PWY]], creatinine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CRNFORCAT-PWY CRNFORCAT-PWY]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-4722]], creatinine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4722 PWY-4722]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7674]]
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* [[PWY-1269]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=589}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19793 19793]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=224}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00611 R00611]
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{{#set: centisome position=15.11471    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=KDO-8PSYNTH-RXN}}
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{{#set: common name=sarcosine_dehydrogenase}}
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{{#set: pathway associated=PWY-7674|PWY-1269}}
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{{#set: ec number=EC-1.5.8.3}}
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{{#set: gene associated=Tiso_gene_14788}}
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{{#set: in pathway=CRNFORCAT-PWY|PWY-4722}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:10, 21 March 2018

Gene Tiso_gene_20348

  • right end position:
    • 589
  • transcription direction:
    • POSITIVE
  • left end position:
    • 224
  • centisome position:
    • 15.11471
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18369&oldid=32713"