|
|
| Line 1: |
Line 1: |
| − | [[Category:Pathway]] | + | [[Category:Gene]] |
| − | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969] == | + | == Gene Tiso_gene_3971 == |
| − | * taxonomic range: | + | * right end position: |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117] | + | ** 15624 |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3035 TAX-3035] | + | * transcription direction: |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224] | + | ** POSITIVE |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174] | + | * left end position: |
| − | * common name: | + | ** 10612 |
| − | ** TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) | + | * centisome position: |
| | + | ** 67.48919 |
| | * Synonym(s): | | * Synonym(s): |
| − | ** citric acid cycle
| |
| − | ** tricarboxylic acid cycle
| |
| − | ** Szent-Gyorgyi-Krebs cycle
| |
| − | ** Krebs cycle
| |
| | | | |
| − | == Reaction(s) found == | + | == Reactions associated == |
| − | '''9''' reactions found over '''12''' reactions in the full pathway
| + | * Reaction: [[NAD+-ADP-RIBOSYLTRANSFERASE-RXN]] |
| − | * [[ACONITATEDEHYDR-RXN]] | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ** 1 associated gene(s):
| + | *** Assignment: ec-number |
| − | *** [[Tiso_gene_13007]]
| + | == Pathways associated == |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | * [[ACONITATEHYDR-RXN]]
| + | |
| − | ** 1 associated gene(s): | + | |
| − | *** [[Tiso_gene_13007]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[annotation-experimental_annotation]] | + | |
| − | * [[CITSYN-RXN]]
| + | |
| − | ** 4 associated gene(s):
| + | |
| − | *** [[Tiso_gene_18030]]
| + | |
| − | *** [[Tiso_gene_9601]]
| + | |
| − | *** [[Tiso_gene_9603]]
| + | |
| − | *** [[Tiso_gene_9602]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | * [[FUMHYDR-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_6720]]
| + | |
| − | *** [[Tiso_gene_3691]]
| + | |
| − | ** 6 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[ISOCIT-CLEAV-RXN]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_14008]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[ISOCITDEH-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_18262]]
| + | |
| − | *** [[Tiso_gene_10809]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[MALATE-DEH-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_1990]]
| + | |
| − | *** [[Tiso_gene_2323]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | * [[MALSYN-RXN]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_14377]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[SUCCCOASYN-RXN]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[Tiso_gene_15846]]
| + | |
| − | *** [[Tiso_gene_11866]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | == Reaction(s) not found == | + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-12912 RXN-12912]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
| + | |
| | == External links == | | == External links == |
| − | {{#set: taxonomic range=TAX-1117}} | + | {{#set: right end position=15624}} |
| − | {{#set: taxonomic range=TAX-3035}} | + | {{#set: transcription direction=POSITIVE}} |
| − | {{#set: taxonomic range=TAX-1224}} | + | {{#set: left end position=10612}} |
| − | {{#set: taxonomic range=TAX-201174}} | + | {{#set: centisome position=67.48919 }} |
| − | {{#set: common name=TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)}} | + | {{#set: reaction associated=NAD+-ADP-RIBOSYLTRANSFERASE-RXN}} |
| − | {{#set: common name=citric acid cycle|tricarboxylic acid cycle|Szent-Gyorgyi-Krebs cycle|Krebs cycle}}
| + | |
| − | {{#set: reaction found=9}}
| + | |
| − | {{#set: total reaction=12}}
| + | |
| − | {{#set: completion rate=75.0}}
| + | |
