Difference between revisions of "CPD-12483"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-499 RXN1G-499] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-lignoceroyl-[acyl-car...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.41-RXN 2.3.1.41-RXN] == * direction: ** REVERSIBLE * common name: ** 3-oxoacyl-synthase * ec...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.41-RXN 2.3.1.41-RXN] == |
* direction: | * direction: | ||
| − | ** | + | ** REVERSIBLE |
* common name: | * common name: | ||
| − | |||
** 3-oxoacyl-synthase | ** 3-oxoacyl-synthase | ||
* ec number: | * ec number: | ||
| Line 12: | Line 11: | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[ACYL-ACP]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[B-KETOACYL-ACP]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 an acyl-[acyl-carrier protein][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''<=>''' 1 a 3-oxoacyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_9885]] |
| − | ** [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | * [[ | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * | + | * Gene: [[Tiso_gene_15991]] |
| − | * [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | ** [[ | + | * Gene: [[Tiso_gene_5939]] |
| − | * [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ** | + | *** Assignment: EC-NUMBER |
| − | *** | + | ** Source: [[annotation-experimental_annotation]] |
| − | * | + | *** Assignment: EC-NUMBER |
| − | ** | + | * Gene: [[Tiso_gene_19302]] |
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_13083]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_14485]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 37: | Line 40: | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| − | |||
| − | |||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | + | * LIGAND-RXN: | |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02768 R02768] |
| + | {{#set: direction=REVERSIBLE}} | ||
{{#set: common name=3-oxoacyl-synthase}} | {{#set: common name=3-oxoacyl-synthase}} | ||
{{#set: ec number=EC-2.3.1.41}} | {{#set: ec number=EC-2.3.1.41}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=Tiso_gene_9885|Tiso_gene_15991|Tiso_gene_5939|Tiso_gene_19302|Tiso_gene_13083|Tiso_gene_14485}} |
| − | {{#set: in pathway= | + | {{#set: in pathway=}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 16:12, 21 March 2018
Contents
Reaction 2.3.1.41-RXN
- direction:
- REVERSIBLE
- common name:
- 3-oxoacyl-synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ACYL-ACP[c] + 1 MALONYL-ACP[c] + 1 PROTON[c] <=> 1 B-KETOACYL-ACP[c] + 1 ACP[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 an acyl-[acyl-carrier protein][c] + 1 a malonyl-[acp][c] + 1 H+[c] <=> 1 a 3-oxoacyl-[acp][c] + 1 a holo-[acyl-carrier protein][c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_9885
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_15991
- Source: orthology-esiliculosus
- Gene: Tiso_gene_5939
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_19302
- Source: orthology-esiliculosus
- Gene: Tiso_gene_13083
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_14485
- Source: orthology-esiliculosus
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- LIGAND-RXN:
