Difference between revisions of "PPI"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2023 RXN0-2023] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2023 RXN0-2023] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** cardiolipin biosynthesis I
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** [http://enzyme.expasy.org/EC/2.8.1.13 EC-2.8.1.13]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[PGPPHOSPHA-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[tRNA-uridine34]][c] '''+''' 1 [[TusE-S-sulfanylcysteine]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[tRNA-2-thiouridine34]][c] '''+''' 1 [[TusE-L-cysteine]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Acceptor]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_18092]]
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** 1 ATP[c] '''+''' 1 a uridine34 in tRNA[c] '''+''' 1 a [TusE sulfur carrier protein]-S-sulfanylcysteine[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 a 2-thiouridine34 in tRNA[c] '''+''' 1 a [TusE sulfur carrier protein]-L-cysteine[c] '''+''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an oxidized electron acceptor[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PHOSPHAGLYPSYN-RXN]]
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* Gene: [[Tiso_gene_2786]]
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** 0 associated gene:
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** Source: [[orthology-esiliculosus]]
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=CARDIOLIPSYN-RXN CARDIOLIPSYN-RXN]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5668 PWY-5668]
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{{#set: ec number=EC-2.8.1.13}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: gene associated=Tiso_gene_2786}}
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{{#set: common name=cardiolipin biosynthesis I}}
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{{#set: in pathway=}}
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{{#set: reaction found=2}}
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{{#set: reconstruction category=orthology}}
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{{#set: total reaction=3}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: completion rate=67.0}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 15:12, 21 March 2018

Reaction RXN0-2023

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 a uridine34 in tRNA[c] + 1 a [TusE sulfur carrier protein]-S-sulfanylcysteine[c] + 1 a reduced electron acceptor[c] => 1 a 2-thiouridine34 in tRNA[c] + 1 a [TusE sulfur carrier protein]-L-cysteine[c] + 1 H+[c] + 1 AMP[c] + 1 diphosphate[c] + 1 an oxidized electron acceptor[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PPI&oldid=32888"