Difference between revisions of "PWY-7626"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALSYN-RXN MALSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** malate_synthase_g * ec nu...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALSYN-RXN MALSYN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** malate_synthase_g
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** phosphatidylcholine biosynthesis I
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.3.9 EC-2.3.3.9]
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* Synonym(s):
 
* Synonym(s):
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** CDP-choline pathway
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** Kennedy pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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  '''1''' reactions found over '''3''' reactions in the full pathway
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** 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLYOX]][c] '''=>''' 1 [[MAL]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
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* [[CHOLINE-KINASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 acetyl-CoA[c] '''+''' 1 H2O[c] '''+''' 1 glyoxylate[c] '''=>''' 1 (S)-malate[c] '''+''' 1 coenzyme A[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_16805]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* [[Tiso_gene_14377]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.15-RXN 2.7.7.15-RXN]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5781 RXN-5781]
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-7295]], L-arabinose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7295 PWY-7295]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7294]], xylose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7294 PWY-7294]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[GLYOXDEG-PWY]], glycolate and glyoxylate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=GLYOXDEG-PWY GLYOXDEG-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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* [[GLYOXYLATE-BYPASS]], glyoxylate cycle: [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
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** '''9''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
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** '''11''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18181 18181]
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{{#set: taxonomic range=TAX-2759}}
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* PIR:
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{{#set: common name=phosphatidylcholine biosynthesis I}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40715 I40715]
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{{#set: common name=CDP-choline pathway|Kennedy pathway}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0195 JX0195]
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{{#set: reaction found=1}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0196 JX0196]
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{{#set: total reaction=3}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S15387 S15387]
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{{#set: completion rate=33.0}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S17773 S17773]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S17774 S17774]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26645 S26645]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S44186 S44186]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S48493 S48493]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S51788 S51788]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYCNMU SYCNMU]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYCSM2 SYCSM2]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYECMA SYECMA]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYHQMA SYHQMA]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYKVMA SYKVMA]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=SYRPMA SYRPMA]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T03412 T03412]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07690 T07690]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T44752 T44752]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00472 R00472]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P42450 P42450]
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** [http://www.uniprot.org/uniprot/Q02216 Q02216]
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** [http://www.uniprot.org/uniprot/P28344 P28344]
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** [http://www.uniprot.org/uniprot/P28345 P28345]
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** [http://www.uniprot.org/uniprot/P30952 P30952]
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** [http://www.uniprot.org/uniprot/Q43827 Q43827]
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** [http://www.uniprot.org/uniprot/P21826 P21826]
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** [http://www.uniprot.org/uniprot/P37330 P37330]
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** [http://www.uniprot.org/uniprot/P17432 P17432]
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** [http://www.uniprot.org/uniprot/P17815 P17815]
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** [http://www.uniprot.org/uniprot/P08997 P08997]
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** [http://www.uniprot.org/uniprot/P21360 P21360]
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** [http://www.uniprot.org/uniprot/P08216 P08216]
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** [http://www.uniprot.org/uniprot/P13244 P13244]
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** [http://www.uniprot.org/uniprot/P49081 P49081]
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** [http://www.uniprot.org/uniprot/P45458 P45458]
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** [http://www.uniprot.org/uniprot/O32913 O32913]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=malate_synthase_g}}
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{{#set: ec number=EC-2.3.3.9}}
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{{#set: gene associated=Tiso_gene_14377}}
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{{#set: in pathway=PWY-7295|PWY-7294|GLYOXDEG-PWY|P105-PWY|GLYOXYLATE-BYPASS|PWY-6969|PWY-6728|PWY-7118}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:14, 21 March 2018

Pathway PWY3O-450

  • taxonomic range:
  • common name:
    • phosphatidylcholine biosynthesis I
  • Synonym(s):
    • CDP-choline pathway
    • Kennedy pathway

Reaction(s) found

1 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7626&oldid=33015"