Difference between revisions of "CPD-8355"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5155 PWY-5155] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] == * direction: ** REVERSIBLE * common name: ** 3-dehydr...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5155 PWY-5155] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** β-alanine biosynthesis III
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** 3-dehydroquinate_synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.71 EC-2.7.1.71]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''1''' reactions found over '''1''' reactions in the full pathway
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* With identifiers:
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* [[ASPDECARBOX-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[SHIKIMATE]][c] '''<=>''' 1 [[SHIKIMATE-5P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_9927]]
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** 1 ATP[c] '''+''' 1 shikimate[c] '''<=>''' 1 shikimate 3-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-synechocystis]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_12435]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_3974]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5155 PWY-5155]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13121 13121]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02412 R02412]
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{{#set: common name=&beta;-alanine biosynthesis III}}
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* UNIPROT:
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P0A6D7 P0A6D7]
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{{#set: total reaction=1}}
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** [http://www.uniprot.org/uniprot/Q9PIB5 Q9PIB5]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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** [http://www.uniprot.org/uniprot/P43880 P43880]
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** [http://www.uniprot.org/uniprot/P63600 P63600]
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** [http://www.uniprot.org/uniprot/Q9CEU1 Q9CEU1]
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** [http://www.uniprot.org/uniprot/P37944 P37944]
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** [http://www.uniprot.org/uniprot/P0A6E1 P0A6E1]
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** [http://www.uniprot.org/uniprot/P10880 P10880]
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** [http://www.uniprot.org/uniprot/Q00497 Q00497]
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** [http://www.uniprot.org/uniprot/P34003 P34003]
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** [http://www.uniprot.org/uniprot/P43906 P43906]
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** [http://www.uniprot.org/uniprot/P72796 P72796]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=3-dehydroquinate_synthase}}
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{{#set: ec number=EC-2.7.1.71}}
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{{#set: gene associated=Tiso_gene_12435|Tiso_gene_3974}}
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{{#set: in pathway=PWY-6163}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:16, 21 March 2018

Reaction SHIKIMATE-KINASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-dehydroquinate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 shikimate[c] <=> 1 shikimate 3-phosphate[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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