Difference between revisions of "Tiso gene 2386"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE--TRNA-LIGASE-RXN ASPARTATE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-778 RXN-778] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE--TRNA-LIGASE-RXN ASPARTATE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-778 RXN-778] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** aspartyl-trna_synthetase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.12 EC-6.1.1.12]
+
** [http://enzyme.expasy.org/EC/1.14.13 EC-1.14.13]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ASP-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-ASP-tRNAs]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[CPD-723]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-724]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 tRNAasp[c] '''+''' 1 ATP[c] '''+''' 1 L-aspartate[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-aspartyl-[tRNAasp][c]
+
** 1 H+[c] '''+''' 1 6-deoxocastasterone[c] '''+''' 1 NADPH[c] '''+''' 1 oxygen[c] '''=>''' 1 6α-hydroxy-castasterone[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17185]]
+
* Gene: [[Tiso_gene_3577]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_8263]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_7126]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13081]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWY-699]], brassinosteroid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''11''' reactions found over '''25''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19649 19649]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05577 R05577]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07450 R07450]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P56459 P56459]
+
−
** [http://www.uniprot.org/uniprot/O26328 O26328]
+
−
** [http://www.uniprot.org/uniprot/O83950 O83950]
+
−
** [http://www.uniprot.org/uniprot/Q58950 Q58950]
+
−
** [http://www.uniprot.org/uniprot/Q9ZLL9 Q9ZLL9]
+
−
** [http://www.uniprot.org/uniprot/O32038 O32038]
+
−
** [http://www.uniprot.org/uniprot/O67589 O67589]
+
−
** [http://www.uniprot.org/uniprot/P43817 P43817]
+
−
** [http://www.uniprot.org/uniprot/O51402 O51402]
+
−
** [http://www.uniprot.org/uniprot/Q9CE80 Q9CE80]
+
−
** [http://www.uniprot.org/uniprot/Q9ZE17 Q9ZE17]
+
−
** [http://www.uniprot.org/uniprot/Q9X1F4 Q9X1F4]
+
−
** [http://www.uniprot.org/uniprot/Q9JT23 Q9JT23]
+
−
** [http://www.uniprot.org/uniprot/O58776 O58776]
+
−
** [http://www.uniprot.org/uniprot/O84546 O84546]
+
−
** [http://www.uniprot.org/uniprot/Q9Z7P2 Q9Z7P2]
+
−
** [http://www.uniprot.org/uniprot/Q9PHM7 Q9PHM7]
+
−
** [http://www.uniprot.org/uniprot/P47282 P47282]
+
−
** [http://www.uniprot.org/uniprot/Q51422 Q51422]
+
−
** [http://www.uniprot.org/uniprot/Q03577 Q03577]
+
−
** [http://www.uniprot.org/uniprot/P36429 P36429]
+
−
** [http://www.uniprot.org/uniprot/P75068 P75068]
+
−
** [http://www.uniprot.org/uniprot/P73851 P73851]
+
−
** [http://www.uniprot.org/uniprot/Q48979 Q48979]
+
−
** [http://www.uniprot.org/uniprot/Q49028 Q49028]
+
−
** [http://www.uniprot.org/uniprot/P04802 P04802]
+
−
** [http://www.uniprot.org/uniprot/P15179 P15179]
+
−
** [http://www.uniprot.org/uniprot/P21889 P21889]
+
−
** [http://www.uniprot.org/uniprot/P14868 P14868]
+
−
** [http://www.uniprot.org/uniprot/P15178 P15178]
+
−
** [http://www.uniprot.org/uniprot/O81892 O81892]
+
−
** [http://www.uniprot.org/uniprot/O74407 O74407]
+
−
** [http://www.uniprot.org/uniprot/O07683 O07683]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=aspartyl-trna_synthetase}}
+
{{#set: ec number=EC-1.14.13}}
−
{{#set: ec number=EC-6.1.1.12}}
+
{{#set: gene associated=Tiso_gene_3577|Tiso_gene_8263}}
−
{{#set: gene associated=Tiso_gene_17185|Tiso_gene_7126|Tiso_gene_13081}}
+
{{#set: in pathway=PWY-699}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 16:17, 21 March 2018

Reaction RXN-778

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 6-deoxocastasterone[c] + 1 NADPH[c] + 1 oxygen[c] => 1 6α-hydroxy-castasterone[c] + 1 NADP+[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-699, brassinosteroid biosynthesis I: PWY-699
    • 11 reactions found over 25 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2386&oldid=33302"