Difference between revisions of "Tiso gene 18523"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TA...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16425 RXN-16425] == * direction: ** LEFT-TO-RIGHT * common name: ** atp-dependent_metalloprotea...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16425 RXN-16425] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** L-proline biosynthesis I
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** atp-dependent_metalloprotease
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** phosphoacetylglucosamine_mutase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''4''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[GLUTKIN-RXN]]
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** 1 [[N-ACETYL-D-GLUCOSAMINE-6-P]][c] '''+''' 1 [[Phosphoacetylglucosamine-Mutase-P]][c] '''=>''' 1 [[N-ACETYL-D-GLUCOSAMINE-16-BIS-P]][c] '''+''' 1 [[Phosphoacetylglucosamine-Mutase]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_12021]]
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** 1 N-acetyl-D-glucosamine 6-phosphate[c] '''+''' 1 a phosphorylated phosphoacetylglucosamine mutase[c] '''=>''' 1 N-acetyl-D-glucosamine 1,6-bisphosphate[c] '''+''' 1 a phosphoacetylglucosamine mutase[c]
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*** [[Tiso_gene_16634]]
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*** [[Tiso_gene_17057]]
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== Genes associated with this reaction  ==
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** 7 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* Gene: [[Tiso_gene_13231]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[orthology-athaliana]]
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* Gene: [[Tiso_gene_13230]]
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*** [[orthology-synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** Assignment: EC-NUMBER
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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* [[GLUTSEMIALDEHYDROG-RXN]]
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*** Assignment: EC-NUMBER
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** 2 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_16634]]
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== Reconstruction information  ==
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*** [[Tiso_gene_16258]]
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* Category: [[annotation]]
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** 6 reconstruction source(s) associated:
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** Tool: [[pathwaytools]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Tool: [[pathwaytools]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PYRROLINECARBREDUCT-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_8625]]
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*** [[Tiso_gene_19254]]
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*** [[Tiso_gene_17059]]
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*** [[Tiso_gene_20218]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SPONTPRO-RXN]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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{{#set: common name=atp-dependent_metalloprotease}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: common name=phosphoacetylglucosamine_mutase}}
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{{#set: taxonomic range=TAX-33154}}
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{{#set: gene associated=Tiso_gene_13231|Tiso_gene_13230}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: in pathway=}}
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{{#set: common name=L-proline biosynthesis I}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction found=4}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: total reaction=4}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: completion rate=100.0}}
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Revision as of 16:17, 21 March 2018

Reaction RXN-16425

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • atp-dependent_metalloprotease
    • phosphoacetylglucosamine_mutase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18523&oldid=33324"