Difference between revisions of "Tiso gene 17613"

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(Created page with "Category:Gene == Gene Tiso_gene_14713 == * left end position: ** 393 * transcription direction: ** NEGATIVE * right end position: ** 5101 * centisome position: ** 7.182018...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33084 TAX-330...")
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[[Category:Gene]]
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[[Category:Pathway]]
== Gene Tiso_gene_14713 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY] ==
* left end position:
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* taxonomic range:
** 393
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33084 TAX-33084]
* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
** NEGATIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* right end position:
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* common name:
** 5101
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** fatty acid β-oxidation I
* centisome position:
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** 7.182018   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction(s) found ==
* [[HISTIDPHOS-RXN]]
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'''5''' reactions found over '''7''' reactions in the full pathway
** experimental_annotation
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* [[ACYLCOADEHYDROG-RXN]]
***ec-number
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** 11 associated gene(s):
* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
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*** [[Tiso_gene_5449]]
** [[pantograph]]-[[synechocystis]]
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*** [[Tiso_gene_16631]]
** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_6295]]
* [[RXN-10952]]
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*** [[Tiso_gene_8272]]
** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_14511]]
* [[RXN0-5408]]
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*** [[Tiso_gene_10643]]
** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_8271]]
== Pathways associated ==
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*** [[Tiso_gene_7447]]
* [[PWY-4702]]
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*** [[Tiso_gene_883]]
* [[PWY-2301]]
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*** [[Tiso_gene_6475]]
* [[PWY-6363]]
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*** [[Tiso_gene_16113]]
* [[HISTSYN-PWY]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ACYLCOASYN-RXN]]
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** 9 associated gene(s):
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_7855]]
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*** [[Tiso_gene_9394]]
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*** [[Tiso_gene_10876]]
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*** [[Tiso_gene_4191]]
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*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_500]]
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*** [[Tiso_gene_348]]
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*** [[Tiso_gene_135]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[ENOYL-COA-HYDRAT-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_16145]]
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*** [[Tiso_gene_6885]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[KETOACYLCOATHIOL-RXN]]
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** 5 associated gene(s):
 +
*** [[Tiso_gene_10116]]
 +
*** [[Tiso_gene_17451]]
 +
*** [[Tiso_gene_3856]]
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*** [[Tiso_gene_3855]]
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*** [[Tiso_gene_15327]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
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* [[OHACYL-COA-DEHYDROG-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_5857]]
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*** [[Tiso_gene_18838]]
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*** [[Tiso_gene_18839]]
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_14026]]
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*** [[Tiso_gene_14027]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-COA-DELTA-ISOM-RXN ENOYL-COA-DELTA-ISOM-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=OHBUTYRYL-COA-EPIM-RXN OHBUTYRYL-COA-EPIM-RXN]
 
== External links  ==
 
== External links  ==
{{#set: left end position=393}}
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* ECOCYC:
{{#set: transcription direction=NEGATIVE}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=FAO-PWY FAO-PWY]
{{#set: right end position=5101}}
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{{#set: taxonomic range=TAX-33084}}
{{#set: centisome position=7.182018    }}
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{{#set: taxonomic range=TAX-33208}}
{{#set: reaction associated=HISTIDPHOS-RXN|MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN|RXN-10952|RXN0-5408}}
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{{#set: taxonomic range=TAX-2}}
{{#set: pathway associated=PWY-4702|PWY-2301|PWY-6363|HISTSYN-PWY}}
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{{#set: common name=fatty acid β-oxidation I}}
 +
{{#set: reaction found=5}}
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{{#set: total reaction=7}}
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{{#set: completion rate=71.0}}

Revision as of 15:19, 21 March 2018

Pathway FAO-PWY

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links