Difference between revisions of "Tiso gene 20064"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7328 PWY-7328] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15889 RXN-15889] == * direction: ** LEFT-TO-RIGHT * common name: ** 4_-phosphopantetheinyl_tran...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7328 PWY-7328] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15889 RXN-15889] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
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** 4_-phosphopantetheinyl_transferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.8.7 EC-2.7.8.7]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''5''' reactions found over '''10''' reactions in the full pathway
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* With identifiers:
* [[GALPMUT-RXN]]
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** 1 [[Apo-EntF]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[Holo-EntF]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-5-ADP]][c]
** 2 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_15395]]
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** 1 an apo-[EntF peptidyl-carrier protein][c] '''+''' 1 coenzyme A[c] '''=>''' 1 a holo-[EntF peptidyl-carrier protein][c] '''+''' 1 H+[c] '''+''' 1 adenosine 3',5'-bisphosphate[c]
*** [[Tiso_gene_3775]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_14278]]
* [[PWY-4861]]
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** Source: [[annotation-in-silico_annotation]]
** 0 associated gene:
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*** Assignment: EC-NUMBER
* [[PWY-7343]]
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== Pathways  ==
** 0 associated gene:
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* [[ENTBACSYN-PWY]], enterobactin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ENTBACSYN-PWY ENTBACSYN-PWY]
* [[PWY-7344]]
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** '''3''' reactions found over '''10''' reactions in the full pathway
** 0 associated gene:
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== Reconstruction information  ==
* [[UDPGLUCEPIM-RXN]]
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* Category: [[annotation]]
** 4 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
*** [[Tiso_gene_9823]]
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*** Tool: [[pathwaytools]]
*** [[Tiso_gene_3236]]
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*** [[Tiso_gene_15395]]
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*** [[Tiso_gene_10797]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-7346 PWY-7346]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-7346 PWY-7346]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis}}
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{{#set: common name=4_-phosphopantetheinyl_transferase}}
{{#set: reaction found=5}}
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{{#set: ec number=EC-2.7.8.7}}
{{#set: total reaction=10}}
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{{#set: gene associated=Tiso_gene_14278}}
{{#set: completion rate=50.0}}
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{{#set: in pathway=ENTBACSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:19, 21 March 2018

Reaction RXN-15889

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4_-phosphopantetheinyl_transferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an apo-[EntF peptidyl-carrier protein][c] + 1 coenzyme A[c] => 1 a holo-[EntF peptidyl-carrier protein][c] + 1 H+[c] + 1 adenosine 3',5'-bisphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links